Professor Albert Y. ZOMAYA

Not everything that can be counted counts, and not everything that counts can be counted. Albert Einstein

Refereed Journal Papers (2000–Present Only)

1.	Lee, Y.-C. and Zomaya, A.Y., “Energy Conscious Scheduling for Distributed Computing Systems under Different Operating Conditions,” *IEEE Transactions on Parallel and Distributed Systems* (in press).
2.	Mezmaz, M., Melab, N., Kessaci, Y., Lee, Y.–C., Talbi, E., Zomaya, A.Y., Tuyttens, D. “A Parallel Bi–objective Hybrid Metaheuristic for Energy–aware Scheduling for Cloud Computing Systems,” *Journal of Parallel and Distributed Computing* (in press).
3.	Iftikhar, M., Landfeldt, B., Zeadally, S., Zomaya, A.Y., “Service Level Agreements (SLAs) Parameter Negotiation between Heterogeneous 4G Wireless Network Operators,” *Journal of Pervasive and Mobile Computing* (in press).
4.	Kharraz, M. –A., Sarbazi–Azad, H., Zomaya, A.Y., “On–demand Multicast Routing Protocol with Efficient Route Discovery,” *Journal of Network and Computer Applications* (in press).
5.	Babaii–Rizvandi, N., Taheri, J. Zomaya, A.Y., 2011, “Some Observations on Optimal Frequency Selection in DVFS–based Energy Consumption Minimization,” *Journal of Parallel and Distributed Computing*, Vol. 71, No. 8, pp. 1154–1164.
6.	Taheri, J., Zomaya, A.Y., Iftikhar, M., 2011, “Fuzzy Online Location Management in Mobile Computing Environments,” *Journal of Parallel and Distributed Computing*, Vol. 71, No. 8, pp. 1142–1153.
7.	Taheri, J. and Zomaya, A.Y., 2011, “On the Performance of Static and Dynamic Location Management Strategies in Mobile Computing,” *International Journal of Foundation of Computer Science*, Vol. 22, No. 3, pp. 519–546.
8.	Lee, Y.-C., Taheri, J., Zomaya, A.Y., “A Parallel Metaheuristic Framework Based on Harmony Search for Scheduling in Distributed Computing Systems,” *International Journal of Foundations of Computer Science* (in press).
9.	Si, W., Zomaya A.Y., Selvakennedy, S., “A Geometric Deployment and Routing Scheme for Directional Wireless Mesh Networks”, *IEEE Transactions on Computers* (in press).
10.	Moraveji, R., MoinzadehP., Sarbazi–Azad, H., Zomaya, A.Y., “Multi-Spanning Tree Zone-Ordered Label-Based Routing Algorithms for Irregular Networks,” *IEEE Transactions on Parallel and Distributed Systems* (in press).
11.	Piraveenan, M., Prokopenko, M., Zomaya, A.Y., “Assortative Mixing in Directed Biological Networks,” *IEEE/ACM Transactions on Computational Biology and Bioinformatics* (in press).
12.	Lee, Y.–C. and Zomaya, A.Y., “Energy Efficient Utilization of Resources in Cloud Computing Systems,” *Journal of Supercomputing* (in press).
13.	Moraveji, R., Sarbazi–Azad, H., and Zomaya, A.Y., 2011, “Performance Modeling of Cartesian Product Networks,” *Journal of Parallel and Distributed Computing*, Vol. 71, No. 1, pp. 105–113.
14.	Yoo, P.D, Ho, S., Ng, J., Charleston, M., Saksena, N.K., Yang, P., Zomaya, A.Y., 2010, “Hierarchical Kernel Mixture Models for the Prediction of AIDS Disease Progression using HIV Structural GP120 Profiles,” *BMC Genomics*, 11(Suppl 4):S22.
15.	Yang, P., Ho, J.W.K., Zomaya, A.Y., Zhou, B.B., 2010, “A Genetic Ensemble Approach for Gene-Gene Interaction Identification,” *BMC Bioinformatics*, Vol. 11, pp. 524-538.
16.	Lizier, J.T., Prokopenko, M. and Zomaya, A.Y., 2010, “Information Modification and Particle Collisions in Distributed Computation,” *Chaos*, Vol. 20, 037109.
17.	Lee, Y. –C. and Zomaya, A.Y., 2010, “Rescheduling for Reliable Job Completion with the Support of Clouds,” *Future Generation Computer Systems*, Vol. 26, No. 8, pp. 1192–1199.
18.	Yang, P., Yang, Y.–H., Zhou, B.B., Zomaya, A.Y., 2010, “A Review of Ensemble Methods in Bioinformatics,” *Current Bioinformatics*, Vol. 5, No. 4, pp. 296–308.
19.	Yang, P., Zhang, Z., Zhou, B.B., and Zomaya, A.Y., 2010, “A Clustering Based Hybrid System for Biomarker Selection and Sample Classification of Mass Spectrometry Data,” *Neurocomputing*, Vol. 73, No. 13–15, pp. 2317–2331.
20.	Wang, P., Zhou, B.B., Wang, C., and Zomaya, A.Y., 2010, “A Novel Integrative Phylogenetic Analysis System,” *International Journal of Computational Biology and Drug Design*, Vol. 3, No. 1, pp. 1–14.
21.	Lee, Y. –C., Zomaya, A.Y., and Siegel, H.J., 2010, “Robust Task Scheduling for Volunteer Computing Systems,” *Journal of Supercomputing*, Vol. 53, No. 1, pp. 163–181.
22.	Moraveji, R., Sarbazi–Azad, H., and Zomaya, A.Y., 2010, “A General Methodology for Direction–Based Irregular Routing Algorithms,” *Journal of Parallel and Distributed Computing*, Vol. 70, No. 4, pp. 363–370.
23.	Si, W., Selvakennedy, S., and Zomaya A.Y., 2010, “An Overview of Channel Assignment Methods for Multi–Radio Multi–Channel Wireless Mesh Networks,” Journal of Parallel and Distributed Computing, Vol. 70, No. 5, pp. 505–524.
24.	Wang, C., Zhou, B.B., and Zomaya, A.Y., 2010, “EvolvingSpace: A Data Centric Framework for Integrating Bioinformatics Applications,” *IEEE Transactions on Computers*, Vol. 59, No. 6, pp. 721–734.
25.	Imani, N., Sarbazi–Azad, H., and Zomaya, A.Y., 2010, “Resource Placement in Cartesian Product of Networks,” *Journal of Parallel and Distributed Computing*, Vol. 70, No. 5, pp. 481–495.
26.	Zia, T.A. and Zomaya, A. Y., 2010, “Quality of Security (QoSec) through Triple Key Scheme (TKS) in Wireless Sensor Networks,” *Journal of Wireless Communications and Mobile Computing*, Vol. 10, pp. 722–732.
27.	Moraveji, R., Sarbazi–Azad, H., and Zomaya, A.Y., 2010, “A General Methodology for Direction-Based Irregular Routing Algorithms,” *Journal of Parallel and Distributed Computing*, Vol. 70, pp. 363–370.
28.	Subrata, R., Zomaya A.Y., and Landfeldt, B., 2010, “Cooperative Power–Aware Scheduling in Grid Computing Environments,” Journal of Parallel and Distributed Computing, Vol. 70, No.2, pp. 84–91.
29.	Yang, P, Zhou, B.B., Zhang, Z., Zomaya, A.Y., 2010, “A Multi-Filter Enhanced Genetic Ensemble System for Gene Selection and Sample Classification of Microarray Data,” *BMC Bioinformatics*, 11(Suppl 1):S5.
30.	Taheri, J. and Zomaya, A.Y., 2010, “RBT–L: A Location Based Approach for Solving the Multiple Sequence Alignment Problem,” *International Journal of Bioinformatics Research and Applications*, Vol. 6, No. 1, pp. 37–57.
31.	Taheri, J. and Zomaya, A.Y., 2009, “Bio–Inspired Algorithms for Mobility Management,” *International Journal of Interconnection Networks*, Vol. 10, No. 4, pp. 497–516.
32.	Lee, Y. –C. and Zomaya, A.Y, 2009, “On Effective Slack Reclamation in Task Scheduling for Energy Reduction,” *Journal of Information Processing Systems*, Vol. 5, No. 4, pp. 175–186.
33.	Yoo, P.D., Zhou, B.B., and Zomaya, A.Y., 2009, “A Modular Kernel Approach for Integrative Analysis of Protein Domain Boundaries,” *BMC Genomics*, 10(Suppl 3):S21.
34.	Yang, P., Xu, L., Zhou, B.B., Zhang, Z. and Zomaya, A.Y., 2009, “A Particle Swarm Based Hybrid System for Imbalanced Medical Data Sampling,” *BMC Genomics*, 10(Suppl 3):S34.
35.	Taheri, J. and Zomaya, A.Y., 2009, “A Simulation Tool for Mobility Management Experiments,” *International Journal of Pervasive Computing and Communications*, Vol. 5, No. 3, pp. 360–379.
36.	Wang, C., Zhou, B.B., and Zomaya, A.Y., 2009, “A Decentralized Method for Scaling up Genome Similarity Search Service,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 20, No. 3, pp. 303–315.
37.	Lee, Y.-C. and Zomaya, A.Y., 2009, “On the Performance of a Dual-Objective Optimization Model for Workflow Applications on Grid Platforms,” *IEEE Transactions on Parallel and Distributed Systems, Vol. 20, No. 9, pp. 1273–1284*.
38.	Khushaba, R.N., Al–Sukker, A., Al–Ani, A., Al–Jumaily, A. and Zomaya, A.Y., 2009, “A Novel Swarm based Feature Selection Algorithm in Multifunction Myoelectric Control,” *Journal of Intelligent and Fuzzy Systems*, Vol. 20, pp. 175–185.
39.	Piraveenan, M., Prokopenko, M. and Zomaya, A.Y., 2009, “Local Assortativity and Growth of Internet,” *European Physical Journal B*, Vol. 70, pp. 275–285.
40.	Taheri, J., and Zomaya, A.Y., 2009, “RBT–GA: A Novel Metaheuristic for Solving the Multiple Sequence Alignment Problem,” *BMC Genomics*, Vol. 10, Suppl. 1, S10.
41.	Imani, N., Sarbazi–Azad, H., and Zomaya, A.Y., Moinzadeh, M. 2009, “Detecting Threats in Star Graphs,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 20, No. 4, pp. 474–483.
42.	Wang, C., Zhou, B.B., and Zomaya, A.Y., 2009, “A Decentralized Method for Scaling up Genome Similarity Search Service,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 20, No. 3, pp. 303–315.
43.	Elghirani, A., Subrata, R., and Zomaya, A.Y., 2009, “Intelligent Scheduling and Replication: A Synergistic Approach,” *Concurrency and Computation: Practice and Experience, Vol. 21, No. 3, pp. 357–376*.
44.	Piraveenan, M., Prokopenko, M. and Zomaya, A.Y., 2009, “Assortativeness and Information Transfer in Scale–Free Networks,” *European Physical Journal B*, Vol. 67, pp. 291–300.
45.	Sikder, A.R. and Zomaya, A.Y., 2009, “Analysis of Protein Phosphorylation Site Predictors with an Independent Dataset,” *International Journal of Bioinformatics Research and Applications*, Vol. 5, No. 1, pp. 20–37.
46.	Piraveenan, M., Prokopenko, M. and Zomaya, A.Y., 2008, “Local Assortativeness in Scale–Free Networks,” *Europhysics Letters*, Vol. 82, 28002.
47.	Sikder, A.R. and Zomaya, A.Y., 2008, “Inferring Boundary Information of Discontinuous Domain Proteins,” *IEEE Transactions on NanoBioscience*, Vol. 7, No. 3, pp. 200–205.
48.	Yoo, P.D., Taheri, J., Zhou, B.B., and Zomaya, A.Y., 2008, “DomNet: Protein Domain Boundary Prediction Using Enhanced General Regression Network and New Profiles,” *IEEE Transactions on NanoBioscience*, Vol. 7, No. 2, pp. 172–181.
49.	Subrata, R., Zomaya A.Y., and Landfeldt, B., 2008, “A Cooperative Game Framework for QoS Guided Job Allocation Schemes in Grids,” *IEEE Transactions on Computers*, Vol. 57, No. 10, pp. 1413–1422.
50.	Yoo, P.D., Ho, Y.S., Zhou, B.B., and Zomaya, A.Y., 2008, “SiteSeek: Post–Translational Modification Analysis Using Adaptive Locality–Effective Kernel Methods and New Profiles,” *BMC Bioinformatics*, Vol. 9, pp. 272–288.
51.	Yoo, P.D., Zhou, B.B., Zomaya, A.Y., 2008, “Machine Learning Techniques for Protein Secondary Structure Prediction: An Overview and Evaluation,” *Current Bioinformatics*, Vol. 3, No. 2, pp. 74–86.
52.	Taheri, J., and Zomaya, A.Y., 2008, “A Modified Hopfield Network for Mobility Management,” *Journal of Wireless Communications and Mobile Computing*, Vol. 8, pp. 355–367.
53.	Lizier, J.T., Prokopenko, M. and Zomaya, A.Y., 2008, “Local Information Transfer as a Spatiotemporal Filter for Complex Systems,” *Physical Review E*, Vol. 77, 026110.
54.	Lee, Y.-C. and Zomaya, A.Y., 2008, “A Novel State Transition Method for Metaheuristic-Based Scheduling in Heterogeneous Computing Systems,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 19, No. 9, pp. 1215–1223..
55.	Yoo, P.D., Sikder, A.R., Zhou, B.B., Zomaya, A.Y., 2008, “Improved General Regression Network for Protein Domain Boundary Prediction,” *BMC Bioinformatics*, Vol. 9, Suppl. 1, S12.
56.	Subrata, R., Zomaya A.Y., and Landfeldt, B., 2008, “A Game Theoretic Approach for Load Balancing in Computational Grids,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 19, No. 1, pp. 66–76.
57.	Taheri, J., and Zomaya, A.Y., 2007, “A Combined Genetic-Neural Algorithm for Mobility Management,” *Journal of Mathematical Modelling and Algorithms*, Vol. 6, No. 3, pp. 481–507.
58.	Imani, N., Sarbazi-Azad, H., and Zomaya, A.Y., 2007, “Capturing an Intruder in Product Networks,” *Journal of Parallel and Distributed Computing*, Vol. 67, No. 9, pp. 1018–1028.
59.	Mazari, A.A., Zomaya, A.Y., Charleston, M., Salem, H., Maher, A. and Garsia, R.J., 2007, “Lability of Antiretroviral Drug Resistance Mutations–Correlates with Immunological and Virological Responses,” *Current HIV Research*, Vol. 5, No. 4, pp. 430–439.
60.	Lee, Y.-C., and Zomaya, A.Y., 2007, “Practical Scheduling Bag–of–Tasks Applications on Grids with Dynamic Resilience,” *IEEE Transactions on Computers*, Vol. 56, No. 6, pp. 815–825.
61.	Salleh, S., Olariu, S., Zomaya, A.Y., Yieng, K.L., Aziz, N.A.B., 2007, “Single-Row Mapping and Transformation of Connected Graphs,” *Journal of Supercomputing*, Vol. 39, No. 1, pp. 73–89.
62.	Boonthum, C., Levinstein, I.B., Olariu, S., Pigli, E., Shurkova, E., and Zomaya, A.Y., 2007, “Mobile Computing: Opportunities for Optimization Research,” *Journal of Computer Communication*, Vol. 30, No. 4, pp. 670–684.
63.	Taheri, J. and Zomaya, A.Y., 2007, “Using the Simulated Annealing Algorithm for Mobile Location Management,” *Journal of Computer Communications*, Vol. 30, No. 4, pp. 714–730
64.	Sikder, A.R. and Zomaya A.Y., 2006, “Improving the performance of DomainDiscovery of Protein Domain Boundary Assignment Using Inter–Domain Linker Index,” *BMC Bioinformatics*, Vol. 7, Suppl. 5, S6, pp. 1–9.
65.	Zhou B.B., Till M., Zomaya A.Y., and Jermiin L.S., “A Parallel Implementation of the Maximum-Likelihood Method for Phylogenetic Analysis,” *International Journal of Computational Science and Engineering* (in press).
66.	Swiecicka, A, Seredynski, F. and Zomaya, A.Y., 2006, “Multiprocessor Scheduling and Re-Scheduling with Use of Cellular Automata and Artificial Immune System Support,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 17, No. 3, pp. 253–262.
67.	Mahmood, O., and Zomaya, A.Y., 2006, “Adaptive Profile Driven Data Caching and Prefetching in Mobile Environment,” *Journal of Ubiquitous Computing and Intelligence*, Vol. 1, pp. 1–7.
68.	Fox, B., Jennings, L.S., and Zomaya, A.Y., 2006, “On the Modelling and Computation of Nonlinear Multibody Cable Dynamics”, *International Journal of Computers and Applications*, Vol. 28, No. 2, pp. 154–161.
69.	Taheri, J. and Zomaya, A.Y., “Realistic Simulations for Studying Mobility Management Problems,” *International Journal of Wireless and Mobile Computing* (in press).
70.	Olariu S., Xu Q., Eltoweissy M., Wadaa A., Zomaya A.Y., 2005, “Protecting the Communication Structure in Sensor Networks,” *International* *Journal of Distributed Sensor Networks*, Vol. 1, Issue 2, pp.187–203.
71.	Tari Z., Broberg J., Zomaya A.Y., Baldoni R., 2005, “A Least Flow-Time First Load Sharing Approach for Distributed Server Farm,” *Journal of Parallel and Distributed Computing*, Vol. 65, pp. 832–842.
72.	Zomaya, A.Y., and Chan, F., 2005, “Efficient Clustering for Parallel Task Execution in Distributed Systems,” *Journal of Foundations of Computer Science*, Vol. 16, No. 2, pp. 281–299.
73.	Sikder, A.R. and Zomaya, A.Y., “An Overview of Protein Folding Techniques: Issues and Perspectives,” *International Journal of Bioinformatics Research and Application*, Vol. 1, No.1, pp. 121–143.
74.	Ma, G. and Zomaya, A.Y., 2004, “An Efficient Channel Allocation Scheme for Cellular Network Using Maximum Channel Packing,” *Journal of Wireless Communication and Mobile Computing*, Vol 4., pp. 683–692.
75.	Johnson, M., Zomaya, A.Y., and Kraetzl, M., 2004, “Modeling External Network Behavior By Using Internal Measurements,” *Journal of Parallel and Distributed Computing*, Vol. 64, pp. 1345-1359.
76.	Seredynski, F., Bouvry, P., and Zomaya, A.Y., 2004, “Cellular Automata Computations and Secret Key Cryptography,” *Parallel Computing*, Vol. 30, Nos. 5–6, pp. 753-766.
77.	Datta, A. and Zomaya, A.Y., 2004, “An Energy-Efficient Permutation Routing Protocol for Single-Hop Radio Networks,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 15, No. 4, pp. 331–338.
78.	Zomaya, A.Y., Patterson, D., and Olariu, S., 2004, “Sequential and Parallel Meta-Heuristics for Solving the Single Row Routing Problem,” *Journal of Cluster Computing*, Vol. 7, pp. 123–139.
79.	Subrata, R. and Zomaya, A.Y., 2003, “Some Results on the Computation of Voronoi Diagrams on Mesh with Multiple Broadcasting,” *Journal of Parallel and Distributed Computing*, Vol. 63, pp. 1300-1314.
80.	Ma, G. and Zomaya, A.Y., 2003, “An Efficient Algorithm for Solving the Minimum Blocking Frequency Assignment Using Channel Reassignment,” *Journal of Interconnection Networks*, Vol. 4, No. 2, pp. 227-245.
81.	Lin, R., Nakano, K., Olariu, S., and Zomaya, A.Y., 2003, “An Efficient Parallel Preffix Sums Architecture with Domino Logic,” *IEEE* *Transactions on Parallel and Distributed Systems*, Vol. 14, No. 9, pp. 922-931.
82.	Zomaya, A.Y., Smith, A., and Seredynski, F., 2003, “On the Use of the Simulated Annealing Algorithm for Channel Allocation in Mobile Computing,” *Wireless* *Communications and Mobile Computing*, Vol. 3, pp. 239-253.
83.	Zomaya, A.Y., Haydock, M. and Olariu, S., 2003, “Some Observations on Using Meta-Heuristics for Efficient Location Management in Mobile Computing Networks,” *Journal of Parallel and Distributed Computing*, Vol. 63, pp. 33-44.
84.	Zomaya, A.Y., “Mobile Computing: Opportunities for Parallel Algorithms Research,” *Journal of* *Foundations of Computer Science*, Vol. 14, No. 1, pp. 19-37.
85.	Subrata, R. and Zomaya, A.Y., 2003, “Dynamic Location Area Scheme for Location Management,” *Telecommunication Systems*, Vol. 22, No. 1–4, pp. 169–187.
86.	Subrata, R. and Zomaya, A.Y., 2003, “A Comparison of Three Artificial Life Techniques for Reporting Cell Planning in Mobile Computing,” *IEEE* *Transactions on Parallel and Distributed Systems*, Vol. 14, No. 2, pp. 142-153.
87.	Subrata, R. and Zomaya, A.Y., 2003, “Evolving Cellular Automata for Location Management in Mobile Computing Networks,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 13, No.11.
88.	Nakano, K., Olariu, S., and Zomaya, A.Y., 2003, “A Time-Optimal Solution for the Path Cover Problem on Cographs,” *Theoretical Computer Science*, Vol. 290, No. 3, pp. 1541 –1556.
89.	Nakano, K., Olariu, S., and Zomaya, A.Y., 2002, “Energy-Efficient Routing in the Broadcast Communication Model,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 13, No. 12, pp. 1201-1210.
90.	Ma, G. and Zomaya, A.Y., 2002, “Bandwidth Allocation in Cellular Systems,” *Computers and Informatics*, Vol. 21, No. 2, pp. 167-182.
91.	Seredynski, F. and Zomaya, A.Y., 2002, “Sequential and Parallel Cellular Automata-based Scheduling Algorithms,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 13, No. 10, pp. 1009-1023.
92.	Zomaya, A.Y. and Wright, M., 2002, "Observations on Using Genetic Algorithms for Channel Allocation in Mobile Computing," *IEEE Transactions on Parallel and Distributed Systems*, Vol. 13, No. 9, pp. 948-962.
93.	Zomaya, A.Y., Karpin, R., and Olariu, S., 2002, “The Single Row Routing Problem Revisited: Solutions Based on Genetic Algorithms,” *VLSI Design*, Vol. 14, No. 2, pp. 123-141.
94.	Zomaya, A.Y., Yates, A., and Olariu, S., 2002, “Fault-Tolerant Recursive Least Squares Computations on a Mesh Connected Parallel Processor,” *Journal of Parallel and Distributed Computing*, Vol. 62, pp. 1142 –1167.
95.	Fox, B., Jennings, L.S., and Zomaya, A.Y., 2002, “On the Modelling of Actuator Dynamics and the Computation of Prescribed Trajectories,” *Journal of Computers & Structures*, Vol. 80, pp. 605-614.
96.	Kapoor, N., Russell, M., Stojmenovic, I., and Zomaya, A.Y., 2002, “A Genetic Algorithm for Finding the Pagenumber of Interconnection Networks,” *Journal of Parallel and Distributed Computing*, Vol. 62, pp. 267-283.
97.	Salleh, S., Sanugi, B., Jamaluddin, H., Olariu, S., and Zomaya, A.Y., 2002, “Enhanced Simulated Annealing Technique for the Single-Row Routing Problem,” *Journal of Supercomputing*, Vol. 21, No. 3, pp. pp. 285-302.
98.	Zomaya, A.Y., Andreson, J.A., Fogel, D.B., Milburn, G.J., and Rozenberg, G., 2001, “Non-conventional Computing Paradigms in the New Millennium,” *IEEE/AIP Computing in Science and Engineering*, November/December, Vol. 3, No. 6, pp. 82-99.
99.	Zomaya, A.Y. and Teh Y.-W., 2001, “Observations on Using Genetic Algorithms for Dynamic Load-Balancing,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 12, No. 9 , pp. 899–911.
100.	Fox, B., Jennings, L.S., and Zomaya, A.Y., 2001, “Numerical Computation of Differential-Algebraic Equations for Non-Linear Dynamics of Multibody Systems Involving Contact Forces,” *ASME Journal of Mechanical Design*, Vol. 123, No. 2, pp. 272-281.
101.	Nakano, K., Olariu, S., and Zomaya, A.Y., 2001, “Energy-Efficient Permutation Routing in Radio Networks,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 12, No. 6, pp. 544-557.
102.	Fox, B., Jennings, L.S., and Zomaya, A.Y., 2001, “The Computation of Constrained Dynamical Systems: Matching Physical Modelling with Numerical Methods,” *IEEE/AIP Computing in Science and Engineering*, Vol. 3, No. 1, pp. 28-36.
103.	Lin, R., Nakano, K., Olariu, S., Pinotti, J., Schwing, J.L., and Zomaya, A.Y., 2000, “Scalable Hardware-Algorithms for Binary Prefix Sums,” *IEEE Transactions on Parallel and Distributed Systems*, Vol. 11, No. 8, pp. 838-850.
104.	Fox, B., Jennings, L.S., and Zomaya, A.Y., 2000, “Numerical Computation of Differential-Algebraic Equations for the Approximation of Artificial Satellite Trajectories and Planetary Ephemerides,” *ASME Journal of Applied Mechanics*, Vol. 67, No. 3, pp. 574-580.
105.	Olariu, S., Stojmenovic, I., and Zomaya, A.Y., 2000, “On the Dynamic Initialization of Parallel Computers,” *Journal of Supercomputing*, Vol. 15, pp. 5-24.

Conference Papers (2000–Present Only)

1.	Chen, J., Wang, C., Zhou, B.B., Sun, L., Lee, Y.-C., Zomaya A.Y., 2011, “Tradeoffs Between Profit and Customer Satisfaction for Service Provisioning in the Cloud,” in the *Proceedings of the 20^th ACM International Symposium on High Performance Distributed Computing (HPDC 2011)*, June 8-11, pp. 229-238, San Jose, CA, USA.
2.	Yoo, P.D., Ng, J.W.P., Zomaya, A.Y., 2011, “An Energy-Efficient Kernel Framework for Large-Scale Data Modeling and Classification,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’11)*, Part of the Proceedings of the 25^th International Parallel and Distributed Processing Symposium, May 16–20, pp. 339-403, Alaska, USA.
3.	Yang, P., Zhang, Z., Zhou, B.B., Zomaya A.Y., 2011, “Sample Subset Optimization for Classifying Imbalanced Biological Data,” in *Advances in Knowledge Discovery and Data Mining¾Proceedings of the 15th Pacific–Asia Conference (PAKDD 2011)*, Part II, Lecture Notes in Computer Science 6635, Springer, Huang J.Z., Cao L., Srivastava J. (eds.), May 24-27, pp. 333-344, Shenzhen, China.
4.	Hussin, M., Lee, Y.-C., and Zomaya A.Y., 2010, “ADERA: A Framework for Adaptive Resource Allocation in Distributed Computing Systems,” in the **Proceedings of the 11^thInternational Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT’10)**, IEEE Computer Society Press, Liao X., Jin H., Zheng R., Zou D. (eds.), December 8–11, p. 50–57, Wuhan, China.
5.	Ahammed, F., Taheri, J., Zomaya, A.Y., Ott, M., 2010, “VLOCI: Using Distance Measurements to Improve the Accuracy of Location Coordinates in GPS–equippred VANETS,” in the *Proceedings of the 7^th International ICST Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services (MobiQuitous’10)*, December 6–9, Sydney Australia.
6.	Huang, G., Delicato, F., Pires, P., Zomaya, A.Y., 2010, “Probabilistic Distance Estimation in Wireless Sensor Networks,” in the Proceedings of the 7^th International ICST Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services (MobiQuitous’10), December 6–9, Sydney Australia (Poster).
7.	Delicato, F., Rodrigues, T., Dantas, P., Pires, P., Miceli, C., Pirmez, L., Huang, G., Zomaya, A.Y., 2010, “A Model-based Approach for Building Ubiquitous Applications based on Wireless Sensor Network,” in the *Proceedings of the 7^th International ICST Conference on Mobile and Ubiquitous Systems: Computing, Networking and Services (MobiQuitous’10)*, December 6–9, Sydney Australia (Poster).
8.	Lee, Y.-C., Zomaya, A.Y., Yousif, M., 2010, “Reliable Workflow Execution in Distributed Systems for Cost Efficiency,” in the *Proceedings of the 11^th IEEE/ACM International Conference on Grid Computing (Grid’10)*, October 25–29, pp. 89–96, Brussels, Belgium.
9.	Mezmaz, M., Kessaci, Y., Lee, Y.-C., Melab, N., Talbi, E., Zomaya, A.Y., Tuyttens, D., 2010, “A Parallel Island–Based Hybrid Genetic Algorithm for Precedence–Constrained Applications to Minimize Energy Consumption and Makespan,” in the *Proceedings of the Workshop on Energy Efficient Grids, Clouds and Clusters (E2GC2’2010), Part of the Proceedings of the 11^th IEEE/ACM International Conference on Grid Computing (Grid’10)*, October 25–29, pp. 274–281, Brussels, Belgium.
10.	Lee, Y.-C. and Zomaya, A.Y., 2010, “Energy–Efficient Resource Allocation in Large–Scale Distributed Systems,” in the *Proceedings of the 9^th International Symposium on Distributed Computing and Applications to Business, Engineering and Science*, IEEE Computer Society, Guo, Q. and Guo, Y., (eds.), August 10–12, pp. 580–583, Hong Kong, China.
11.	Mezmaz, M., Lee, Y.-C., Melab, N., Talbi, E., and Zomaya, A.Y., 2010, “A Bi–objective Hybrid Genetic Algorithm to Minimize Energy Consumption and Makespan for Precedence–constrained Applications Using Dynamic Voltage Scaling,” in the *Proceedings of the* *WCCI 2010 IEEE World Congress on Computational Intelligence*, July 18–23, pp. 25–32, Barcelona, Spain.
12.	Wang, T.-C., Taheri, J., and Zomaya, A.Y., 2010, “A Combinative Strategy for Higher Reliable tag SNPs Selection,” in the Proceedings of the International Conference on Bioinformatics & Computational Biology (BIOCOMP’10), July 12–15, pp. 85–90, CSREA Press, Las Vegas Nevada, USA.
13.	Lee, Y.-C., Wang, C., Taheri, J., Zomaya A.Y., and Zhou, B.B., 2010, “On the Effect of Using Third–Party Clouds for Maximizing Profit,” in the *Proceedings of the 10^th International Conference on Algorithms and Architectures for Parallel Processing (ICA3PP)*, Lecture Notes in Computer Science 6081, Springer, Ching-Hsien, H., Yang, L.T., Park, J.H. and Yeo, S.-S. (eds.), May 21–23, pp. 381–390, Busan, Korea.
14.	Babaii-Rizvandi, N., Taheri, J., Zomaya A.Y., and Lee, Y.-C., 2010, “Linear Combinations of DVFS–Enabled Processor Frequencies to Modify the Energy–Aware Scheduling Algorithms,” in the *Proceedings of the 10^th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing (CCGrid’2010)*, May 17–20, pp. 388–397, Melbourne, Australia.
15.	Lee, Y.-C., Wang, C., Zomaya A.Y., and Zhou, B.B., 2010, “Pofit–Driven Service Request Scheduling in Clouds,” in the *Proceedings of the 10^th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing (CCGrid’2010)*, May 17–20, pp. 15–24, Melbourne, Australia.
16.	Hussin, M., Lee, Y.-C., and Zomaya A.Y., 2010, “Dynamic Job–Clustering with Different Computing Priorities for Computational Resource Allocation,” in the *Proceedings of the 10^th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing (CCGrid’2010)*, May 17–20, pp. 589–590, Melbourne, Australia.
17.	Taheri, J. and Zomaya, A.Y., 2010, “A Voting Scheme to Improve the Secondary Structure Prediction,” in the Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’2010), May 16–19, Hammamet, Tunisia.
18.	Taheri, J. and Zomaya, A.Y., 2010, “RBT–Km: K–Means Clustering for Multiple Sequence Alignment,” in the Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’2010), May 16–19, Hammamet, Tunisia.
19.	Aalsalem, M.Y., Taheri, J., and Zomaya, A.Y., 2010, “A Framework for Real Time Communication in Sensor Networks,” in the Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’2010), May 16–19, Hammamet, Tunisia.
20.	Si, W. and Zomaya A.Y., 2010, “Midpoint Routing Algorithms for Delaunay Triangulations,” in the *Proceedings of the 24^th International Parallel and Distributed Processing Symposium (IPDPS’2010)*, April 19–23, pp. 1–7, Atlanta, Georgia, USA.
21.	Lee, Y.-C. and Zomaya, A.Y., 2010, “Resource Allocation for Energy–Efficient Large–Scale Distributed Systems,” in the *Proceedings of the 4^th International Conference on Systems, Technology and Management (ICISTM’10)*, Communications in Computer and Information Science, , Springer, Prasad, S., Vin, H.M., Sahni, S., Jaiswal, M.P. and Thipakorn, B. (eds.), March 11–13, p. 16–19, Bangkok, Thailand.
22.	Li, W., Zomaya, A.Y., and Al-Jumaily, A., 2009, “Cellular Automata Based Models of Wireless Sensor Networks,” in the *Proceedings of the 7^th ACM International Symposium on Mobility Management and Wireless Access (MobiWac’09)*, in conjunction with the Proceedings of the 12^th ACM International Conference on Modeling, Analysis, and Simulation of Wireless and Mobile Systems, October 26–29, pp. 1–6, Tenerife, Canary Islands, Spain.
23.	Zomaya, A.Y., 2009, “Energy–Aware Scheduling and Resource Allocation for Large–Scale Distributed Systems,” in the *Proceedings of the 11^th IEEE International Conference on High Performance Computing and Communications (HPCC’09)*, June 25–27, p. xxxv, Seoul, South Korea.
24.	Lee, Y.-C. and Zomaya, A.Y., 2009, “Minimizing Energy Consumption for Precedence–Constrained Applications Using Dynamic Voltage Scaling,” in the *Proceedings of the 9^th IEEE/ACM International Symposium on Cluster Computing and the Grid*, May 18–21, pp. 92–99, Shanghai, China.
25.	Pecero, J., Trystram, D., and Zomaya, A.Y., 2009, “A New Genetic Algorithm for Scheduling for Large Communication Delays,” in the *Proceedings of the 15^th International Euro-Par Conference (EuroPar’09)*, Lecture Notes in Computer Science Volume 5704/2009, Springer, Sips, H., Epema, D., and Lin, H.-X. (eds.), August 25–28, pp. 241–252, Delft, The Netherlands.
26.	Abu Bakar, S., Taheri., and Zomaya, A.Y., 2009, “Fuzzy Systems Modeling for Protein–Protein Interaction Prediction in Saccharomyces Cerevisie” in the Proceedings of the 18^th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation, Modelling and Simulation Society of Australia and New Zealand and International Association for Mathematics and Computers in Simulation, Anderssen, R.S., Braddock, R.D., and Newham, L.T.H. (eds.), July 13–17, Cairns, Australia.
27.	Lee, Y.-C. and Zomaya, A.Y., 2009, “Interweaving Heterogeneous Metaheuristics Using Harmony Search,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’09)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, May 23–29, Rome, Italy.
28.	Taheri, J. and Zomaya, A.Y., 2009, “SSPT: Secondary Structure Prediction Triangle,” in the *Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications* (AICCSA’09), May 10–13, pp. 743–749, Rabat, Morocco.
29.	Moraveji, R., Sarbazi–Azad, H., and Zomaya, A.Y., 2009, “A General Methodology for Routing in Irregular Networks,” in the **Proceedings of the 17^th Euromicro International Conference on Parallel, Distributed and Network–based Processing**, February 18–20, pp. 155–160, Weimar, Germany.
30.	Zomaya, A.Y., 2008, “Hybrid Intelligent Methods for Solving Mobility Management Problems,” in the *Proceedings of the 8^th International Conference on Hybrid Intelligent Systems*, September 10–12, p. xxxv, Barcelona, Spain.
31.	Elghirani, A., Subrata, R., and Zomaya, A.Y., 2008, “A Proactive Non–Cooperative Game–Theoretic Framework for Data Replication in Data Grids,” in the *Proceedings of the 8^th IEEE International Symposium on Cluster Computing and the Grid*, May 19–22, Lyon, France.
32.	Lizier, J., Prokopenko, M. and Zomaya, A.Y., 2008, “The Information Dynamics of Phase Transitions in Random Boolean Networks,” in the *Proceedings of the Artificial Life XI: Proceedings of the Eleventh International Conference on the Simulation and Synthesis of Living Systems*, Bullock, S., Noble, J., Watson, R., and Bedau, M.A. (eds.), pp. 374–381, MIT Press, Cambridge, MA.
33.	Lizier, J., Prokopenko, M., Tanev, I. and Zomaya, A.Y., 2008, “Emergence of Glider-Like Structures in a Modular Robotic System,” in the *Proceedings of the Artificial Life XI: Proceedings of the Eleventh International Conference on the Simulation and Synthesis of Living Systems*, Bullock, S., Noble, J., Watson, R., and Bedau, M.A. (eds.), pp. 366–373. MIT Press, Cambridge, MA.
34.	Taheri, J. and Zomaya, A.Y., 2008, “Bio–inspired Algorithms for Mobility Management,” in the *Proceedings of the 9^th International Symposium on Parallel Architectures, Algorithms, and Networks (ISPAN’08)*, May 7–9, pp. 216–223, Sydney, Australia.
35.	Aalsalem, M.Y., Iftikhar, M., Taheri, J., and Zomaya, A.Y., 2008, “On the Provisioning of Guaranteed QoS in Wireless Sensor Networks through Limited Service Polling Models,” in the *Proceedings of the 5^th IFIP Wireless and Optical Communication Networks*, May 5–7, pp. 1–7, Surabaya, Indonesia.
36.	Lee, Y.-C., and Zomaya, A.Y., 2008, “Resource–Centric Task Allocation in Grids with Artificial Danger Model Support,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’08)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 14–8, Miami, Florida.
37.	Yoo, P.D., Ho, Y.S., Zhou, B.B., and Zomaya, A.Y., 2008, “Adaptive Locality–Effective Kernel Machine for Protein Phosphorylation Site Prediction,” in the *Proceedings of the 7^th IEEE International Workshop on High Performance Computational Biology (HiCOMB’08)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 14–8, Miami, Florida.
38.	Nguyen, V.A., and Zomaya, A.Y., 2008, “Inference of Large–Scale Structural Features of Gene Regulation Networks Using Genetic Algorithms,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’08)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 14–8, Miami, Florida.
39.	Taheri, J., and Zomaya, A.Y., 2008, “RBT–I: A Novel Approach for Solving the Multiple Sequence Alignment Problem,” in the **Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’08)**, March 31–April 4, pp. 28–36, Doha, Qatar.
40.	Elghirani, A., Subrata, R., Zomaya, A.Y., and Al Mazari, A., 2008, “Performance Enhancement through Hybrid Replication and Genetic Algorithm Co–Scheduling in Data Grids,” in the **Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’08)**, March 31–April 4, pp. 436–443, Doha, Qatar.
41.	Aalsalem, M.Y., Taheri, J., Iftikhar, M., and Zomaya, A.Y., 2008, “Providing QoS Guarantees to Multiple Classes of Traffic in Wireless Sensor Networks,” in the *Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’08)*, March 31–April 4, pp. 216–222, Doha, Qatar.
42.	Alba, E., Garcia-Nieto, J., Taheri, J., Zomaya, A.Y., 2008, “New Research in Nature Inspired Algorithms for Mobility Management in GSM Networks,” in the *Proceedings of EvoWorkshops*, Lecture Notes in Computer Science, Springer, Giacobini M. et al. (eds.), March 26–28, pp. 1–10, Naples, Italy.
43.	Zomaya, A.Y., 2007, “Exploring Biocomplexity: New Challenges for High Performance Computing,” in the Proceedings of the *8^thInternational Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT’07)*, IEEE Computer Society Press, Munro D., Shen H., Shen Q.Z., Detmold H., Falkner K.E., Izu C., Coddington P.D., Alexander B., Zheng S.–Q. (eds.), December 3–6, p. 6, Adelaide, Australia.
44.	Imani, N., Sarbazi-Azad, H., and Zomaya, A.Y., 2007, “Distant–Based Resource Placement in Product Networks,” in the Proceedings of the *8^thInternational Conference on Parallel and Distributed Computing, Applications and Technologies (PDCAT’07)*, IEEE Computer Society Press, Munro D., Shen H., Shen Q.Z., Detmold H., Falkner K.E., Izu C., Coddington P.D., Alexander B., Zheng S.–Q. (eds.), December 3–6, pp. 31–35, Adelaide, Australia.
45.	Zia, T.A, and Zomaya, A. Y., Ababneh, N., 2007, “Evaluation of Overheads in Security Mechanisms in Wireless Sensor Networks,” in the *Proceedings of the International Conference on Sensor Technologies and Applications (SensorComm’07)*, October 14–20, pp. 181–185, Valencia, Spain.
46.	Alqaralleh, B.A., Wang, C., Zhou, B.B., and Zomaya, A.Y., 2007, “A Proactive Method for Content Distribution in a Data Indexed DHT Overlay,” in the *Proceedings of the 3^rd International Conference on High Performance Computing and Communications*, Lecture Notes in Computer Science 4782 Springer, Perrott, R.H., Chapman, B.M., Subhlok, J., de Mello, R.F., Yang, L.T. (eds.), September 26–38, pp. 599–610, Houston.
47.	Lizier, J.T., Prokopenko, M. and Zomaya, A.Y., 2007, “Detecting Non-Trivial Computation in Complex Dynamics,” in the *Proceedings of the 9^th European Conference on Artificial Life*, Lecture Notes in Computer Science 4648 Springer, e Costa, F.A., Rocha, L.M., Costa, E., Harvey, I., Coutinho, A. (eds.), September 10–14, pp. 895–904, Lisbon, Portugal.
48.	Piraveenan, M., Prokopenko, M. and Zomaya, A.Y., 2007, “Information-Cloning of Scale-free Networks,” in the *Proceedings of the 9^th European Conference on Artificial Life*, Lecture Notes in Computer Science 4648 Springer, e Costa, F.A., Rocha, L.M., Costa, E., Harvey, I., Coutinho, A. (eds.), September 10–14, pp. 925–935, Lisbon, Portugal.
49.	Wang, C., Zhou, B.B. and Zomaya, A.Y., 2007, “Scaling up Genome Similarity Search Services through Content Distribution,” in the **Proceedings of the International Conference on Parallel Processing (ICPP’07)**, September 10–14, Xian, China.
50.	Imani, N., Sarbazi-Azad, H., and Zomaya, A.Y., 2007, “Some Properties of WK-Recursive and Swapped Networks,” in the Proceedings of the *5th International Symposium Parallel and Distributed Processing and Applications*, Lecture Notes in Computer Science 4742 Springer, Stojmenovic I., Thulasiram R.K., Yang L.T., Minyi G., de Mello R.F. (eds.), August 29–31, pp. 856–867, Niagara Falls, Canada.
51.	Wang, C., Zhou, B.B., Brites, F., Liu, B., and Zomaya, A.Y., 2007, “Distributing Genome Sequence Databases with a Publish/Subscribe Middleware,” in the **Proceedings of the 1^st International Conference on Self-Adaptive and Self-Organizing Systems (SASO’07)**, July 9–11, pp. 273–276, Boston.
52.	Lu, K. and Zomaya, A.Y., 2007, “A Hybrid Policy for Job Scheduling and Load Balancing in Heterogeneous Computational Grids,” in the **Proceedings of the 6^th International Symposium on Parallel and Distributed Computing**, July 5–8, pp. 121–128, Hagenberg, Austria.
53.	Tarawneh, M., Zhou, B.B., Wang, and Zomaya, A.Y., 2007, “Investigation of Relationships Among Excavate Taxa Using a New Quartet-Based Phylogenetic Analysis Method,” in the *Proceedings of the Symposium on Bioinformatics and Life Science Computing*, Advanced Information, Networking, and Applications Workshops/Symposia, May 21–23, pp. 662–667, Niagara Falls, Ontario, Canada.
54.	Elghirani, A., Zomaya, A.Y., Subrata, R., 2007, “An Intelligent Replication Framework for Data Grids,” in the **Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’07)**, May 13–16, pp. 351–358, Amman, Jordan.
55.	Al Mazari, A., Zomaya, A.Y., Charleston, M., Garsia, R.J., 2007, “A Novel Algorithm for Adaptive and Neutral Evolutionary Patterns Associated with HIV Drug Resistance,” in the **Proceedings of the ACS/IEEE International Conference on Computer Systems and Applications (AICCSA’07)**, May 13–16, pp. 285–292, Amman, Jordan.
56.	Elghirani, A., Subrata, R., Zomaya, and Zomaya, A.Y., 2007, “Intelligent Scheduling and Replication in Datagrids: a Synergistic Approach,” in the *Proceedings of the 7^th IEEE International Symposium on Cluster Computing and the Grid*, May 14–17, pp. 179–182, Rio de Janeiro, Brazil.
57.	Lee, Y.-C., and Zomaya, A.Y., 2007, “An Artificial Immune System for Heterogeneous Multiprocessor Scheduling with Task Duplication,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’07)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, March 26–30, Long Beach, California.
58.	Alqaralleh, B.A., Wang, C., Zhou, B.B., and Zomaya, A.Y., 2007, “Effects of Replica Placement Algorithms on Performance of structured Overlay Networks,” in the *Proceedings of the International Workshop on Hot Topics in Peer-to-Peer Systems*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, March 26–30, Long Beach, California.
59.	Aal Salem, M.Y., Everitt, D., and Zomaya, A.Y., 2007, “An Interoperability Framework for Sensor and UMTS Networks,” in the *Proceedings of the 3^rd International Conference on Wireless and Mobile Communications*, March 4–9, Guadeloupe, French Caribbean.
60.	Wang, P., Zhou, B.B., Tarawneh, M., Chu, D., and Zomaya, A.Y., 2007, “A Global Maximum Likelihood Super-Quartet Phylogeny Method,” in the *Proceedings of the 5^th Asia Pacific Bioinformatics Conference (APBC’07)*, January 15–17, Hong Kong.
61.	Zia, T.A. and Zomaya, A.Y., 2007, “Secure Localization in Wireless Sensor Networks,” in the *Proceedings of the 4^th Asian Conference on Communication Systems and Networks (AsiaCSN’07)*, April 2–4, Phuket, Thailand.
62.	Zia, T.A. and Zomaya, A.Y., 2007, “Malicious Node Detection Mechanism in Wireless Sensor Networks,” in the *Proceedings of the International Conference on Network Security (ICONS’07)*, Jan 29–31, Erode, India.
63.	Imani, N., Sarbazi-Azad, H., and Zomaya, A.Y., 2006, “Capturing an Intruder in Product Networks,” in the 13^th Proceedings of the International Conference on High Performance Computing *(HiPC’06)*, December 18–21, pp. 193–204, Bangalore, India.
64.	Zia, T.A. and Zomaya, A.Y., 2006, “Security Issues in Wireless Sensor Networks,” in the Proceedings of the *International Conference on Systems and Networks*, Nov 2–4, pp. 40, Tahiti, French Polynesia.
65.	Taheri, J., and Zomaya, A.Y., 2006, “Clustering Techniques for Dynamic Mobility Management,” in the *4^th ACM Workshop on Mobility Management and Wireless Access (Part of MSWiM’06)*, October 2, pp. 10–17, Malaga, Spain.
66.	Zhou, B.B., Tarawneh, M., Chu, D., Wang, P., Wang, C., Zomaya, A.Y., and Brent, R.P., 2006, “On a New Quartet-based Phylogeny Reconstruction Algorithm,” in the Proceedings of the International Conference on Bioinformatics and Computational Biology *(BIOCOMP’06)*, June 26–29, Las Vegas, Nevada.
67.	Wang, C., Alqaralleh, B., Zhou, B.B., Brites, G., Zomaya, A.Y., 2006, “Self-organizing Content Distribution on a Data Indexed DHT Network,” in the Proceedings of the *6^th IEEE Conference on Peer to Peer Computing*, September 6–8, pp. 241–248, Cambridge, U.K.
68.	Zhou, B.B., Tarawneh, M., Chu, D., Wang, P., Wang, C., Zomaya, A.Y., and Brent, R.P., 2006, “Evidence of Multiple Maximum Likelihood Points for a Phylogenetic Tree,” *Proceedings of IEEE 6^th Symposium on Bioinformatics and Bioengineering (BIBE 2006), October 16–18, Washington* D.C.
69.	Lee, Y.-C., and Zomaya, A.Y., 2006, “Data Sharing Pattern Aware Scheduling on Grids,” in the *Proceedings of the International Conference on Parallel Processing*, August 14–18, pp. 365–372, Columbus, Ohio.
70.	Sikder A.R., Veretnik, S., Zomaya A.Y., Bourne, P.E., 2006, “DomainDiscovery: A New Approach to Sequence-Based Assignment of Protein Domain Boundaries Using A Support Vector Machine,” *the LSS Computational Systems Bioinformatics Conference*, August 14–18, Stanford University, California.
71.	Sikder A.R., Veretnik, S., Zomaya A.Y., Bourne, P.E., 2006, “DomainDiscovery: A Novel Algorithm for Protein Domain Boundary Assignment Using Support Vector Machine,” *the 14^th Annual Meeting of the International Society for Computational Biology, ISMB’06 and 2^nd Annual AB³C Conference*, August 6–10, Fortaleza, Brazil.
72.	Lee, Y.-C., and Zomaya, A.Y., 2006, “A Grid Scheduling Algorithm for Bag-of-Tasks Applications Using Multiple Queues with Duplication,” in the Proceedings of the 5^th IEEE/ACIS International Conference on Computer and Information Science and 1^st IEEE/ACIS International Workshop on Component-Based Software Engineering, Software Architecture and Reuse (ICIS-COMSAR’06), July 10–12, pp. 5–10, Honolulu, Hawaii.
73.	Landfeldt, B., Hassan, J., Zomaya, A.Y., Manitpornsut, S., and Subrata, R., 2006, “Titan: A New Paradigm in Wireless Internet Access based on Community Collaboration,” in the **Proceedings of the International Wireless Communications and Mobile Computing Conference** (IWCMC 2006), July 3–6, pp. 331–337, Vancouver, Canada.
74.	Taheri, J., and Zomaya, A.Y., 2006, “A Combined Genetic-Neural Algorithm for Mobility Management,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’06)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, Rhodes Island, Greece, April.
75.	Zhou, B.B., Tarawneh, M., Chu, D., Wang, P., Wang, C., Zomaya, A.Y., and Brent, R.P., 2006, “On a New Quartet-based Phylogeny Reconstruction Algorithm,” to be presented in the *2006 International Conference on Bioinformatics and Computational Biology (BIOCOMP’06)*, Nevada.
76.	Zhou, B.B., Chu, D., Tarawneh, M., Wang, P., Wang, C., Zomaya, A.Y., and Brent, R.P., 2006, “Parallel Implementation of a Quartet-based Algorithm for Phylogenetic Analysis,” in the Proceedings of the *5^th IEEE International Workshop on High Performance Computational Biology*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, Rhodes Island, Greece, April.
77.	Lu, K., Subrata, R., and Zomaya, A.Y., 2006, “Towards Decentralized Load Balancing in a Computational Grid Environment,” to be presented in the *1^st International Conference on Grid and Pervasive Computing* (to be published in Springer Verlag Lecture Notes in Computer Science), Taichung, Taiwan.
78.	Lu, K., Subrata, R., and Zomaya, A.Y., 2006, “An Efficient Load Balancing Algorithm for Heterogeneous Grid Systems Considering Desirability of Grid Sites,” to be presented in the *25^th IEEE International Performance Computing and Communications Conference*, Phoenix, Arizona, USA.
79.	Wang, C., Alqaralleh, B.A, Zhou, B.B., Till, M., and Zomaya, A.Y., 2005, “A BLAST Service Built on Data Indexed Overlay Network,” in the Proceedings of the *1^st International Conference on e-Science and Grid Computing*, H. Stockinger, R. Buyya, R. Perrott (eds.), December 5–8, pp. 16–23, Melbourne, Australia.
80.	Taheri, J., and Zomaya, A.Y., 2005, “A Simulated Annealing Approach for Mobile Location Management,” in the Proceedings of the *1^st IEEE International Workshop on Performance and Management of Wireless and Mobile Networks*, in conjunction with the 30^th IEEE International Conference on Local Computer Networks, November 15–17, pp. 568–576, Sydney, Australia.
81.	Zia, T., and Zomaya, A.Y., 2005, “An Analysis of Programming and Simulations in Sensor Networks,” in the Proceedings of the *1^st International Workshop on Sensor Networks and Applications*, October 20–21, pp. 15–19, Beijing, China.
82.	Zhou, B.B., Tarawneh, M., Wang, C., Zomaya, A.Y., and Brent, R., 2005, “A Novel Quartet-Based Method for Phylogenetic Inference,” in the Proceedings of the *5^th IEEE Symposium on Bioinformatics and Bioengineering (BIBE’05)*, October 19–21, pp. 32–39, Minnesota.
83.	Zomaya, A.Y., 2005, “Grid and High Performance Computing: Opportunities for Bioinformatics Research,” in the Proceedings of the *International Conference on High Performance Computing and Communications (HPCC-05)*, September 21–23, p. 3, Sorrento, Italy.
84.	Lee, Y.-C., and Zomaya, A.Y., 2005, “A Productive Duplication-Based Scheduling Algorithm for Heterogeneous Computing Systems,” in the Proceedings of the *International Conference on High Performance Computing and Communications (HPCC-05)*, September 21-23, pp. 203–212, Sorrento, Italy.
85.	Chatterjee, D., Tari, Z., and Zomaya, A.Y., 2005, “A Task-Based Adaptive-TTL Approach for Web Server Load Balancing,” in Proceedings of the *10^th IEEE Symposium on Computers and Communications*, June 27–30, pp. 877–884, Cartagena, Spain.
86.	Sikder A.R. and Zomaya A.Y., 2005, “Protein Homology modeling Using Sequence-Sequence Profiles with PAM Matrices,” in the *Proceedings of the 7^th International Conference Bioinformatics*, June 9-12, 2005, Tartu, Estonia.
87.	Chu D., Till M., Zomaya A.Y., 2005, “Parallel Ant Colony Optimization for 3D Protein Structure Prediction Using the HP Lattice Model,” in *Proceedings of the Workshop on Nature Inspired Distributed Computing, Part of Proceedings of the International Parallel and Distributed Processing Symposium*, April 4–8, Denver, Colorado.
88.	Taheri J. and Zomaya A.Y., 2005, “A Simulated Annealing Approach for Mobile Location Management,” in *Proceedings of the Workshop on Nature Inspired Distributed Computing*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 4–8, Denver, Colorado.
89.	Wang C., Zhou B.B., Zomaya A.Y., 2004, “Quartet Based Phylogenetic Inference: A Grid Approach,” in *Proceedings of the International Conference on Parallel and Distributed Processing and Applications*, Springer Lecture Notes in Computer Science, December 13–15, pp. 387–91, Hong Kong, China.
90.	Till M., Zhou B.B., Zomaya A.Y., and Jermiin L., 2004, “Phylogenetic Analysis Using Maximum Likelihood Methods in Homogeneous Parallel Environments’ in *Proceedings of the 5^th International Conference on Parallel and Distributed Computing: Applications and Technologies*, Springer Lecture Notes in Computer Science, December 8–10, pp. 274–279, Singapore.
91.	Olariu, S., Xu, Q., and Zomaya, A.Y., 2004, “An Energy-Efficient Self-Organization Protocol for Wireless Sensor Networks,” in the *Proceedings of the Intelligent Sensors, Sensor Networks, and Information Processing Conference (ISSNIP-04)*, December 14–17, pp. 55-60, Melbourne, Australia.
92.	Taheri, J., and Zomaya, A.Y., 2004, “The Use of a Hopfield Neural Network in Solving the Mobility Management Problem,” in the Proceedings of the IEEE/ACS International Conference on Pervasive Services (ICPS-04), July 19–23, Beirut, Lebanon, pp. 141-150.
93.	Olariu, S., Shirhatti, R., and Zomaya, A.Y., 2004, “OSCAR - An Opportunistic Call Admission Protocol for LEO Satellite Networks,” in the *Proceedings of the International Conference on Parallel Processing (ICPP-04)*, August 15–18, Montreal, Canada.
94.	Zomaya, A.Y., and Chan, F., 2004, “Efficient Clustering for Parallel Task Execution in Distributed Systems,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’04)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 26-30, Santa Fe, New Mexico.
95.	Zhou, B.B., Till, M., Zomaya, A.Y., and Jermiin, L., 2004, “Parallel Implementation of Maximum Likelihood Methods for Phylogenetic Analysis,” in the *Proceedings of the Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC’04)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 26-30, Santa Fe, New Mexico.
96.	Bouvry, P., Seredynski, F., and Zomaya, A.Y., 2003, “Application of Cellular Automata for Cryptography,” in the *Proceedings of the International Conference on Parallel Processing and Applied Mathematics* (PPAM 2003), to be published in Springer LNCS. Czestochowa, September 7-10, Poland.
97.	Seredynski, F., Bouvry, P., and Zomaya, A.Y., 2003, “Cellular Programming and Symmetric Key Cryptography Systems,” in the *Proceedings of Genetic and Evolutionary Computation Conference* (GECCO’03), Chicago, IL, USA, July 12-16, E. Cant u-Paz et al. (Eds.), LNCS 2724, pp.1369 –1381, Springer-Verlag, Berlin Heidelberg.
98.	Seredynski, F., Zomaya, A.Y., Bouvry, P., 2003, “Function Optimization with Coevolutionary Algorithms,” *In the Proceedings of the International Intelligent Information Processing and Web Mining Conference*, published by Springer Verlag in Series on Advances in Soft Computing, June, Zakopane, Poland, ISBN 3-540-00843-8.
99.	Seredynski, F., Bouvry, P., and Zomaya, A.Y., 2003, “Secret Key Cryptography with Cellular Automata,” in the *Proceedings of the Workshop on Nature Inspired Distributed Computing (NIDISC’03)*, Part of the Proceedings of the International Parallel and Distributed Processing Symposium, April 22-26, Nice, France, pp. 149-155.
100.	Datta, A. and Zomaya, A.Y., 2002, “New Energy-Efficient Permutation Routing Protocol for Single-Hop Radio Networks,” in the Proceedings of the *8^th Annual International Conference on Computing and Combinatorics*, August 15-17, Singapore (published in Lecture Notes in Computer Science, Springer-Verlag, Berlin, vol. 2387, pp. 249-258).
101.	Zomaya, A.Y., 2002, “Mobile Computing: Opportunities for Parallel Algorithms Research,” in the Proceedings of the *Workshop on Advances in Parallel and Distributed Computational Models (APDCM)* (published in the CD-ROM Proceedings of the 16th International Parallel and Distributed Processing Symposium), pp. 144–147, April 15, Marriott Marina, Fort Lauderdale, Florida, IEEE Computer Society Press, Los Alamitos, CA, USA.
102.	Subrata, R. and Zomaya, A.Y., 2002, “Artificial Life Techniques for Reporting Cell Planning in Mobile Computing,” in the Proceedings of the *Workshop on Biologically Inspired Solutions to Parallel Processing Problems (BioSP3)* (published in the CD-ROM Proceedings of the 16th International Parallel and Distributed Processing Symposium), pp. 203 –210, April 19, Marriott Marina, Fort Lauderdale, Florida, IEEE Computer Society Press, Los Alamitos, CA, USA.
103.	Seredynski, F. and Zomaya, A.Y., 2002, “Parallel and Distributed Computing with Coevolutionary Algorithms,” in the Proceedings of the *Workshop on Biologically Inspired Solutions to Parallel Processing Problems (BioSP3)* (published in the CD-ROM Proceedings of the 16th International Parallel and Distributed Processing Symposium), pp. 202 –209, April 19, Marriott Marina, Fort Lauderdale, Florida, IEEE Computer Society Press, Los Alamitos, CA, USA.
104.	Diab, H., Damaj, I., and Zomaya, A.Y., 2002, “New applications on state-of-the-art RC multiprocessing systems,” *International Conference on Research Trends in Science and Technology (RTST 2002)*, pp. 333-343, March 4-6, Lebanese American University, Beirut, Lebanon.
105.	Seredynski, F. and Zomaya, A.Y., 2001, “Coevolution and Evolving Parallel Cellular Automata-Based Scheduling Algorithms,” in Proceedings of *Evolution Artificielle* (EA’01), October 20, 30, 31, Le Creusot, France, 2001.
106.	Subrata, R. and Zomaya, A.Y., 2001, "Location Management in Mobile Computing," in the Proceedings of the *ACS/IEEE International Conference on Computer Systems and Applications*, pp. 287-289, June 26-29, Beirut, Lebanon.
107.	Seredynski, F., Swiecicka, A., and Zomaya, A.Y., 2001, "Discovery of Parallel Scheduling Algorithms in Cellular Automata-based Systems," in Proceedings of the *Workshop on Biologically Inspired Solutions to Parallel Processing Problems (BioSP3)* (published in the CD-ROM Proceedings of the 15th International Parallel and Distributed Processing Symposium), April 23, San Francisco, USA.
108.	Fox, B., Jennings, L.S., and Zomaya, A.Y., 2000, "A Multibody Dynamics Approach to the Modelling of Nonlinear Cable Systems," in the Proceedings of the *ISCA 13th International Conference on Computer Applications in Industry and Engineering (CAIE)*, pp. 157-160, Honolulu, Hawaii, USA.
109.	Nakano, K., Olariu, S., and Zomaya, A.Y., 2000, "Energy-Efficient Deterministic Routing Protocols in Radio Networks," in the Proceedings of the *International Conference on Parallel Processing (ICPP-2000)*, pp. 181-188, Toronto, Canada, August 21-24.

Organization of Special Issues (2000–Present Only)

1.	Zomaya, A.Y., 2011, “State of the Journal,” *IEEE Transactions on Computers*, Vol. 60, No. 5, pp. 609–613.
2.	Zomaya, A.Y., 2011, “State of the Journal,” *IEEE Transactions on Computers*, Vol. 1, No. 2, p. 2.
3.	Cesana, M., Boukerche, A., Zomaya, A.Y., 2011, “Guest Editorial: Security for QoS Assured Wireless and Mobile Networks,” *Journal of Security and Communication Networks*, Vol. 4, No. 3, pp. 239–241.
4.	Hidalgo, J.I., Fernandez-de-Vega, F., Lanchares, J., Cantu-Paz, E., Zomaya, A.Y., 2010, “Guest Editorial: Parallel Architectures and Bioinspired Algorithms,” *Parallel Computing*, Vol. 36, No. 10–11, pp. 553–554.
5.	Zeadally, S., Zomaya, A.Y., Chao, H. –C., 2009, “Editorial for special issue on Mobility Management and Wireless Access,” *Telecommunication Systems*, Vol. 42, No. 3–4, pp. 163–164.
6.	Ould-Khaoua, M. and Zomaya, A.Y., 2008, “Editorial: Performance Evaluation of Wireless Networks,” *Journal of Interconnection Networks*, Vol. 9, No. 3, p. vii.
7.	Bononi, L. and Zomaya, A.Y., 2008, “Mobility Management and Wireless Access,” *Journal of Computer Communications*, Vol. 31, No. 5, pp. 871–872.
8.	Landfeldt, B. and Zomaya, A.Y., 2008, “Behavior, Artifacts, and Solutions in Wireless Mesh Networks,” *Journal of Parallel and Distributed Computing*, Vol. 68, No. 3, pp. 275–277.
9.	Talbi, E., Alba, E., Zomaya, A.Y., 2007, “Guest Editorial: Applications of Nature Inspired Algorithms,” *Journal of Mathematical Modelling and Algorithms*, Vol. 6, No. 3, pp. 317–318.
10.	Alba, E., Talbi, E., Zomaya, A.Y., 2007, “Guest Editorial: Nature Inspired Distributed Computing,” *Journal of Computer Communications*, Vol. 30, No. 4, pp. 653–655.
11.	Sarbazi-Azad, H., Ould-Khaoua, M., Zomaya, A.Y., 2006, “Editorial: Performance Evaluation of Communication Networks for Parallel and Distributed Systems,” *Parallel Computing*, Vol. 32, Nos. 11–12, pp. 775–776.
12.	Talbi, E., Zomaya, A.Y., 2006, “Guest Editorial: Grids in Bioinformatics and Computational Biology,” *Journal of Parallel and Distributed Computing*, Vol. 66, No. 12, p. 1481.
13.	Guo, M. and Zomaya, A.Y., 2006, “Editorial: Special Section on Parallel/Distributed Computing and Networking,” IEICE Trans Information and Systems, E89–D, pp. 387–389.
14.	Sarbazi-Azad, H., Ould-Khaoua, E., Zomaya, A.Y., 2005, “Editorial: Design and Performance of Networks for Super-, Cluster-, and Grid Computing: Parts II,” *Journal of Parallel and Distributed Computing*, Vol. 65, No. 11, pp. 1301–1304.
15.	Sarbazi-Azad, H., Ould-Khaoua, E., Zomaya, A.Y., 2005, “Editorial: Design and Performance of Networks for Super-, Cluster-, and Grid Computing: Parts I,” *Journal of Parallel and Distributed Computing*, Vol. 65, No. 10, pp. 1119–1122.
16.	Alba E., Talbi E., Zomaya A.Y., 2005, “Guest Editorial: Nature Inspired Distributed Computing,” *International* *Journal of Foundations of Computer Science*, Vol 16, No 2, pp239–40
17.	Zomaya, A.Y., Ercal, F., and Talbi, E., 2004, “Special Issue on Parallel and Nature Inspired Computational Paradigms and Applications,” *Parallel Computing*, Vol. 30, Nos. 5–6, pp. 551-552.
18.	Kumar, M. and Zomaya, A.Y., 2004, “Special Issue on Parallel Processing Issues in Mobile Computing,” *Journal on Special Topics in Mobile Networking and Applications*, Vol 9, Issue 4.
19.	Zomaya, A.Y. and Olariu, S., 2002, “Special Issue on Parallel Evolutionary Computing,” *Journal* *of Parallel and Distributed* *Computing*, Vol. 62, No. 9, pp. 1335-1337.
20.	Zomaya, A.Y., 2001, “Parts I and II: Scheduling: Theory and Applications,” International *Journal of Foundations of Computer Science*, Vol. 12, No. 5 and 6 (pp. 559-564 in Vol. 12, No. 5).
21.	Zomaya, A.Y., Ercal, F., and Olariu, S., 2001, “Parallel Computing Problems and Nature-Inspired Solutions,” *Journal of Future Generation of Computer Systems*, Vol. 17, No. 4, pp. v-vii.

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Last updated: July 5, 2011