University of Sydney Handbooks - 2013 Archive

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Table 1: Plant science

Table 1 lists units of study available to students in the Bachelor of Science and combined degrees. The units are available to students enrolled in other degrees in accordance with their degree resolutions.

Unit of study Credit points A: Assumed knowledge P: Prerequisites C: Corequisites N: Prohibition Session

Plant Science

for a major in Plant Science, the minimum requirement is 24 credit points from senior units of study listed in this subject area, including a minimum of 12 credit points of senior PLNT units.
Intermediate units of study
PLNT2001
Plant Biochemistry and Molecular Biology
6    P 12 Junior credit points from Chemistry and Biology (or with the Dean's permission BIOL1201 and BIOL1202)
N PLNT2901, AGCH2004
Semester 1
PLNT2901
Plant Biochem & Molecular Biology (Adv)
6    P Distinction average in 12 Junior credit points from Chemistry and Biology (or with the Dean's permission BIOL1201 and BIOL1202)
N PLNT2001, AGCH2004
Semester 1
BIOL2016
Cell Biology
6    A BIOL1001
P 12cp of Junior BIOL, OR 6cp of Junior BIOL and 6cp of Junior MBLG1001/1901, OR 6cp of Junior BIOL and 6cp of Junior CHEM
N BIOL2916
Semester 1
BIOL2916
Cell Biology (Advanced)
6    A BIOL1001
P Distinction average in 12cp of Junior BIOL, OR distinction average in 6cp of Junior BIOL and 6cp of Junior MBLG1001/1901, OR distinction average in 6cp of Junior BIOL and 6cp of Junior CHEM
N BIOL2016
Semester 1
BIOL2023
Botany
6    A BIOL1001 OR BIOL1002
P 6cp Junior BIOL and 6cp Junior Sciences
N BIOL2923, PLNT2003, PLNT2903, PLNT2002, PLNT2902, BIOL2003, BIOL2903, BIOL2004,BIOL2904


Students planning to major in biology or plant sciences are recommended to complete MBLG1001/1901 before enrolling in this unit.
Semester 1
BIOL2923
Botany (Advanced)
6    A BIOL1001 OR BIOL1002
P Distinction average in minimum 6 credit points of Junior Biology units of study + 6CP junior sciences
N BIOL2023, PLNT2003, PLNT2903, PLNT2002, PLNT2902, BIOL2003, BIOL2903, BIOL2004, BIOL2904


Students planning to major in biology or plant sciences are recommended to complete MBLG1001/1901 before enrolling in this unit.
Semester 1
BIOL2024
Ecology and Conservation
6    A BIOL1002 or BIOL1902
P 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901
N BIOL2924
Semester 2
BIOL2924
Ecology and Conservation (Advanced)
6    A BIOL1002 or BIOL1902
P Distinction average in either 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901. These requirements may be varied and students with lower averages should consult the Unit Coordinator.
N BIOL2024
Semester 2
BIOL2022
Biology Experimental Design & Analysis
6    P 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901
N BIOL3006, BIOL3906, BIOL2922
Semester 2
BIOL2922
Biol Experimental Design & Analysis Adv
6    P Distinction average in either 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901. These requirements may be varied and students with lower averages should consult the Unit Coordinator.
N BIOL3006, BIOL3906, BIOL2022
Semester 2
MBLG2072
Genetics and Genomics
6    A 12cp of Junior Chemistry
P 6cp of Junior Biology and (one of MBLG1001 and MBLG1901) and 6cp of Junior Chemistry
N MBLG2972


For students planning a Molecular Biology and Genetics major, 12cp of Junior Chemistry is required.
Semester 2
MBLG2972
Genetics and Genomics (Adv)
6    A 12cp of Junior Chemistry
P Distinction average across 6cp of Junior and 6cp of Bology, 6 cp of Junior Molecular Biology and Genetics and 6cp of Junior Chemistry
N MBLG2072


For students planning for a molecular biology and genetics major, 12cp of Junior Chemistry is required.
Semester 2
Senior units of study
BIOL3009
Terrestrial Field Ecology
6    A BIOL (3006 or 3906). Prior completion of one of these units is very strongly recommended.
P 12 credit points of Intermediate Biology or (ANSC2004 and (BIOM2001 or ENVX2001).
N BIOL3909


One 6 day field trip held in the pre-semester break (22- 27 July 2012), and 4x4 hr practical classes during weeks 1-4 in Semester 2.
Int August
BIOL3909
Terrestrial Field Ecology (Advanced)
6    A BIOL (3006 or 3906). Prior completion of one of these units is very strongly recommended.
P Distinction average in 12 credit points of Intermediate Biology or ANSC2004 and BIOM2001
N BIOL3009


One 6 day field trip held in the pre-semester break (22 - 27 July 2012) and 4x4 hr practical classes during weeks 1-4 in Semester 2.
Int August
BIOL3017
Fungi in the Environment
6    P 12 credit points of Intermediate Biology or Plant Science, or 6 credit points of Intermediate Biology, or Plant Science, and 6 Intermediate credit points of either Microbiology or Geography.
N BIOL3917


Dates: Monday 18th February to Friday 1st of March 2013.The completion of 6 credit points of MBLG units is highly recommended.Please note that this unit will not be available after 2013.
Int February
BIOL3917
Fungi in the Environment (Advanced)
6    P Distinction average in 12 credit points of Intermediate Biology and Plant Science, or 6 credit points of Intermediate Biology, or Plant Science, and 6 Intermediate credit points of either Microbiology or Geography.
N BIOL3017


The completion of 6 credit points of MBLG units is highly recommended.Please note that this unit will not be available after 2013.
Int February
PLNT3001
Plant, Cell and Environment
6    P 12 credit points of Intermediate Biology, Plant Science, Molecular Biology and Genetics
N PLNT3901
Semester 2
PLNT3901
Plant, Cell and Environment (Advanced)
6    P 12 credit points of Intermediate Biology, Plant Science, Molecular Biology and Genetics
N PLNT3001

Note: Department permission required for enrolment

Semester 2
PLNT3002
Plant Growth and Development
6    P 12 credit points of intermediate PLNT, BIOL, AGCH or CROP units of study including at least one of PLNT2001, PLNT2901, PLNT2003, PLNT2903, BIOL2016, BIOL2916, BIOL2003, BIOL2903, BIOL2006, BIOL2906, CROP2001, AGCH2002
N PLNT3902, BIOL3021, BIOL3931
Semester 2
PLNT3902
Plant Growth and Development (Advanced)
6    P 12 credit points of intermediate PLNT, BIOL, AGCH or CROP units of study including at least one of PLNT2001, PLNT2901, PLNT2003, PLNT2903, BIOL2016, BIOL2916, BIOL2003, BIOL2903, BIOL2006, BIOL2906, CROP2001, AGCH2002. These requirements may be varied and students with lower averages should consult the unit Executive Officer.
N PLNT3002, BIOL3021, BIOL3931
Semester 2
PLNT3003
Systematics and Evolution of Plants
6    P 6 credit points of any Intermediate unit of study from BIOL, PLNT, LWSC, HORT, GEOS, GEOG, ENVI, SOIL.
N PLNT3903
Semester 1
PLNT3903
Systematics and Evolution of Plants Adv
6    P Distinction average in 6 credit points of any Intermediate unit of study from BIOL, PLNT, LWSC, HORT, GEOS, GEOG, ENVI, SOIL. These requirements may be varied and students with lower averages should consult the Unit Executive Officer.
N PLNT3003
Semester 1
PPAT3003
Plant Disease
6    P MICR2024
Semester 1
PPAT4004
Advanced Mycology and Plant Pathology
6    P PPAT3003
Semester 1
PPAT4005
Soil Biology
6    P MICR2024 or 6cp intermediate microbiology
Semester 1
HORT3005
Production Horticulture
6    A AFNR1001 and AFNR1002
P Two of PLNT2001, PLNT2901, PLNT2002, PLNT2902, PLNT2003, PLNT2903
Semester 1

Plant Science

for a major in Plant Science, the minimum requirement is 24 credit points from senior units of study listed in this subject area, including a minimum of 12 credit points of senior PLNT units.
Intermediate units of study
PLNT2001 Plant Biochemistry and Molecular Biology

Credit points: 6 Teacher/Coordinator: Dr Thomas Roberts Prof Les Copeland Session: Semester 1 Classes: 2x1-hr lectures/week, 1x1-hr tutorial/week commencing week 2, 1x3-hr practical weekly Prerequisites: 12 Junior credit points from Chemistry and Biology (or with the Dean's permission BIOL1201 and BIOL1202) Prohibitions: PLNT2901, AGCH2004 Assessment: 1x1hr exam (15%) and 1x1.5hr exam (45%) and lab reports (40%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Hort Sc, B L W Sc, B Med Sc, B Res Ec, B Sc, B Sc (Marine Science), B Sc (Molecular Biology & Genetics), B Sc (Molecular Biotechnology), B Sc Agr, UG Study Abroad Program.
This unit of study is designed to develop an understanding of the molecular principles that underlie the structure and function of plants and how these principles relate to the use of plants by humans as a source of food and fibre. The unit is a core unit for BScAgr students and an elective for BSc and other degree programs. It recognizes the specialized nature of plant biochemistry and molecular biology and is a platform for students who wish to gain a sound knowledge of plant growth and development.
This unit covers the biochemistry of the main carbohydrate, lipid, protein and nucleic acid constituents of plants , metabolic pathways that regulate plant growth and development, the mobilization and deposition of storage reserves, storage and expression of genetic information and control of gene expression in plant responses to environmental influences. The tools and techniques of molecular biology and their applications in plant biotechnology will also be explored.
At the completion of this unit students will be able to demonstrate theoretical knowledge of the biochemical structure and function of plants and how molecular biology can enhance our use of plants as food and fibres. Students will also be able to demonstrate abilities in the practice of laboratory methods used to analyse plants and the effective communication of experimental findings. Students enrolled in this unit will gain research and enquiry skills through attendance at lectures and participation in laboratory classes and tutorials, information literacy and communication skills through the synthesis of information used to prepare practical reports, social and professional understanding by participation in groupwork and assessments that seek to understand the role of agriculture in the broader community.
Textbooks
No recommended text. A study guide/laboratory manual will be available for purchase from the Copy Centre during the first week of semester. Lecture notes and readings will be available through WebCT.
PLNT2901 Plant Biochem & Molecular Biology (Adv)

Credit points: 6 Teacher/Coordinator: Dr Thomas Roberts Prof Les Copeland Session: Semester 1 Classes: 2x1-hr lectures/week, 1x1-hr tutorial/week commencing week 2, 1x3-hr practical weekly Prerequisites: Distinction average in 12 Junior credit points from Chemistry and Biology (or with the Dean's permission BIOL1201 and BIOL1202) Prohibitions: PLNT2001, AGCH2004 Assessment: 1x1hr exam (15%) and 1x1.5hr exam (45%) and project report (40%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Hort Sc, B L W Sc, B Med Sc, B Res Ec, B Sc, B Sc (Marine Science), B Sc (Molecular Biology & Genetics), B Sc (Molecular Biotechnology), B Sc Agr, UG Study Abroad Program.
This unit of study is designed to develop an understanding of the molecular principles that underlie the structure and function of plants and how these principles relate to the use of plants by humans as a source of food and fibre.
This unit is offered at an advanced level and is available to students in BScAgr, BSc and other degree programs. This unit recognizes the specialized nature of plant biochemistry and is of interest to students who wish to gain a more advanced knowledge of plant growth and development.
This unit covers the biochemistry of the main carbohydrate, lipid, protein and nucleic acid constituents of plants , metabolic pathways that regulate plant growth and development, the mobilization and deposition of storage reserves, storage and expression of genetic information and plant responses to environmental influences. The tools and techniques of molecular biology and their applications in plant biotechnology will also be explored.
At the completion of this unit students will be able to demonstrate theoretical knowledge of the biochemical structure and function of plants and how molecular biology can enhance our use of plants as food and fibres. Students will also be able to demonstrate abilities in the practice of laboratory methods used to analyse plants and the effective communication of experimental findings by completing a short research project.
Students enrolled in this unit will gain research and enquiry skills through attendance at lectures and tutorials and by completing a small research project and information literacy and communication skills through the synthesis of information used to prepare a report on the findings of the research project.
Textbooks
No recommended text. A study guide/laboratory manual will be available for purchase from the Copy Centre during the first week of semester. Lecture notes and readings will be available through WebCT.
BIOL2016 Cell Biology

Credit points: 6 Teacher/Coordinator: Dr M Thomson. Session: Semester 1 Classes: 2x1 hr lectures/week, 1x4 hr practical/week. Prerequisites: 12cp of Junior BIOL, OR 6cp of Junior BIOL and 6cp of Junior MBLG1001/1901, OR 6cp of Junior BIOL and 6cp of Junior CHEM Prohibitions: BIOL2916 Assumed knowledge: BIOL1001 Assessment: 1x3 hr theory exam, 1 project assignment, 1 practical report (100%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Med Sc, B Sc, B Sc (Marine Science), B Sc (Molecular Biology & Genetics), UG Study Abroad Program.
This unit of study focuses on contemporary principles in cell biology and development in plant and animals, with emphasis on cellular functions and favouring the molecular perspective. Topics include cancer and control of cell division and migration, pre-programmed cell death, molecular signalling and transport systems, cellular endocrinology and embryonic development. The practical component provides students with hands-on training in key research techniques using modern equipment and is therefore of immense benefit to students contemplating honours study or a career in molecular and cellular research.
Textbooks
Alberts B, Johnson A, Lewis J, Raff M, Roberts K, Walter P. 2007. Molecular Biology of the Cell. 5th Edition. Garland Science.
BIOL2916 Cell Biology (Advanced)

Credit points: 6 Teacher/Coordinator: Dr Murray Thomson. Session: Semester 1 Classes: 2x1 hr lectures/week, 1x4 hr practical/week. Prerequisites: Distinction average in 12cp of Junior BIOL, OR distinction average in 6cp of Junior BIOL and 6cp of Junior MBLG1001/1901, OR distinction average in 6cp of Junior BIOL and 6cp of Junior CHEM Prohibitions: BIOL2016 Assumed knowledge: BIOL1001 Assessment: 1x3 hr exam, 1 practical report, 1 project assignment (100%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Med Sc, B Sc, B Sc (Marine Science), B Sc (Molecular Biology & Genetics), UG Study Abroad Program.
Qualified students will participate in alternative components of BIOL2016 Cell Biology.
Textbooks
as for BIOL2016
BIOL2023 Botany

Credit points: 6 Teacher/Coordinator: Dr Rosanne Quinnell, A/Prof Murray Henwood Session: Semester 1 Classes: 2 lect,1 tut,2-3 h prac/week Prerequisites: 6cp Junior BIOL and 6cp Junior Sciences Prohibitions: BIOL2923, PLNT2003, PLNT2903, PLNT2002, PLNT2902, BIOL2003, BIOL2903, BIOL2004,BIOL2904 Assumed knowledge: BIOL1001 OR BIOL1002 Assessment: 1x 2-hr exam (40%), anatomy project (20%), quizzes (10%), 1 X 2 h prac exam (30%) Associated degrees: B A, B Med Sc, B Sc, UG Study Abroad Program.
Note: Students planning to major in biology or plant sciences are recommended to complete MBLG1001/1901 before enrolling in this unit.
This unit focuses on the remarkable world of plants and recent advances in botanical research. A phylogenetic approach provides the systematic foundation to this unit. Students are introduced to large-scale patterns in plant morphology and distribution (biogeography). At a smaller scale, this unit of study investigates the structure of cells, tissues and organs of flowering plants and addresses how plants are constructed and how they respond to environmental signals (incl. stress responses). There is a focus on recent advances in research, which are critical in enhancing our understanding of the botanical world.
Students will develop skills in phylogenetic inference and plant identification. The information on plant structure will be provided in self-instructional audio-visual sessions augmented by small group discussions. The practical sessions and interactions with staff encourage students to develop their own learning style and enhance a strong sense of self-reliance. Critical thinking, effective communication and other vocational and generic skills are emphasized. The content is well suited to students with interests in botany, ecology, bioinformatics, environmental science, molecular and cell biology, genetics and biotechnology; agriculture (e.g. horticulture, land and water science, and natural resources); and broader disciplines (e.g. education, arts, and environmental law).
Textbooks
Evert RF and Eichhorn SE. 2013. Raven: Biology of Plants. 8th Ed. Freeman & Co Publishers. New York. NY.
BIOL2923 Botany (Advanced)

Credit points: 6 Teacher/Coordinator: Dr Rosanne Quinnell, A/Prof. Murray Henwood Session: Semester 1 Classes: 2 lec, 1 tut, 2-3 h prac/week Prerequisites: Distinction average in minimum 6 credit points of Junior Biology units of study + 6CP junior sciences Prohibitions: BIOL2023, PLNT2003, PLNT2903, PLNT2002, PLNT2902, BIOL2003, BIOL2903, BIOL2004, BIOL2904 Assumed knowledge: BIOL1001 OR BIOL1002 Assessment: 1x 2-hr exam (40%), 1 X 2 h prac exam (30%), research project (30%) Associated degrees: B A, B Med Sc, B Sc, UG Study Abroad Program.
Note: Students planning to major in biology or plant sciences are recommended to complete MBLG1001/1901 before enrolling in this unit.
The content of BIOL2923 will be based on BIOL2023 but qualified students will participate in alternative components at a more advanced level. The content and nature of these components may vary from year to year.
Textbooks
Evert RF and Eichhorn SE. 2013. Raven: Biology of Plants. 8th Ed. Freeman & Co Publishers. New
BIOL2024 Ecology and Conservation

Credit points: 6 Teacher/Coordinator: A/Prof Peter Banks Session: Semester 2 Classes: 2 lec/wk, 3h prac/wk Prerequisites: 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901 Prohibitions: BIOL2924 Assumed knowledge: BIOL1002 or BIOL1902 Assessment: Practical reports/presentations (50%), 1x 2hr exam (50%) Associated degrees: B A, B Med Sc, B Sc, UG Study Abroad Program.
This unit examines the ecological principles driving the major ecosystems of the world and ecological processes behind the world's major conservation issues. It aims to develop in students the core foundations for an understanding of Ecology and its application in conservation. Lectures will focus on the ecology of the major terrestrial and marine biomes of the world. Application of ecological theory and methods to practical conservation problems will be integrated throughout the unit of study. Practical sessions will provide hands-on experience in ecological sampling and data handling to understand the ecology of marine and terrestrial environments, as well as ecological simulations to understand processes.
Textbooks
Recommended: Essentials of Ecology 3rd edition (2008). Townsend, CR, Begon, M, Harper, JL . John
BIOL2924 Ecology and Conservation (Advanced)

Credit points: 6 Teacher/Coordinator: A/Prof Peter Banks Session: Semester 2 Classes: 2 lec/wk, 3h prac/wk Prerequisites: Distinction average in either 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901. These requirements may be varied and students with lower averages should consult the Unit Coordinator. Prohibitions: BIOL2024 Assumed knowledge: BIOL1002 or BIOL1902 Assessment: Practical reports/presentations (50%), 1x 2hr exam (50%) Associated degrees: B A, B Med Sc, B Sc, UG Study Abroad Program.
The content will be based on the standard unit BIOL2024 but qualified students will participate in alternative components at a more advanced level. This unit examines the ecological principles driving the major ecosystems of the world and ecological processes behind the world's major conservation issues. It aims to develop in students the core foundations for an understanding of Ecology and its application in conservation. Lectures will focus on the ecology of the major terrestrial and marine biomes of the world. Application of ecological theory and methods to practical conservation problems will be integrated throughout the unit of study. Practical sessions will provide hands-on experience in ecological sampling and data handling to understand the ecology of marine and terrestrial environments, as well as ecological simulations to understand processes.
Textbooks
Recommended: Essentials of Ecology 3rd edition (2008). Townsend, CR, Begon, M, Harper, JL . John
BIOL2022 Biology Experimental Design & Analysis

Credit points: 6 Teacher/Coordinator: A/Prof Clare McArthur Session: Semester 2 Classes: 2 lec/wk, 3h prac/wk Prerequisites: 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901 Prohibitions: BIOL3006, BIOL3906, BIOL2922 Assessment: Practical reports/presentations (60%), 1x 2hr exam (40%) Associated degrees: B A, B Med Sc, B Sc, UG Study Abroad Program.
This unit will consider biology as a quantitative, experimental and theoretical science. It is concerned with the underlying principles and practical skills required to explore questions and test hypotheses in research disciplines where background variation (error) is inherently high. Application of theory and methods to practical problems will be integrated throughout the unit of study. Lectures will focus on sound experimental and statistical principles, drawing on real examples to demonstrate concepts. The unit will provide an understanding of how research is designed, analysed and interpreted using statistics. Practical sessions will provide hands-on experience in designing and performing research in topics relevant to each student's particular sub-discipline, using appropriate statistical tools. Computer simulations and statistical packages for analyses will be used where needed. The unit provides foundational skills essential for doing research and for critically judging the research of others.
Textbooks
Required: Ruxton, G. and Colegrave, N. 2010. Experimental design for the life sciences. 3rd Ed. Oxford
BIOL2922 Biol Experimental Design & Analysis Adv

Credit points: 6 Teacher/Coordinator: A/Prof Clare McArthur Session: Semester 2 Classes: 2 lec/wk, 3h prac/wk Prerequisites: Distinction average in either 12cp Junior BIOL; OR 6cp Junior BIOL and 6cp MBLG1001/1901. These requirements may be varied and students with lower averages should consult the Unit Coordinator. Prohibitions: BIOL3006, BIOL3906, BIOL2022 Assessment: Practical reports/presentations (60%), 1X 2hr exam (40%) Associated degrees: B A, B Med Sc, B Sc, UG Study Abroad Program.
The content will be based on the standard unit BIOL2022 but qualified students will participate in alternative components at a more advanced level. This unit will consider biology as a quantitative, experimental and theoretical science. It is concerned with the underlying principles and practical skills required to explore questions and test hypotheses in research disciplines where background variation (error) is inherently high. Application of theory and methods to practical problems will be integrated throughout the unit of study. Lectures will focus on sound experimental and statistical principles, drawing on real examples to demonstrate concepts. The unit will provide an understanding of how research is designed, analysed and interpreted using statistics. Practical sessions will provide hands-on experience in designing and performing research in topics relevant to each student's particular sub-discipline, using appropriate statistical tools. Computer simulations and statistical packages for analyses will be used where needed. The unit provides foundational skills essential for doing research and for critically judging the research of others.
Textbooks
Required: Ruxton, G. and Colegrave, N. 2010. Experimental design for the life sciences. 3rd Ed. Oxford
MBLG2072 Genetics and Genomics

Credit points: 6 Teacher/Coordinator: Dr Penny Smith Session: Semester 2 Classes: Two 1-hour lectures per week; one 2-3 hour practical per week. One tutorial every second week. Prerequisites: 6cp of Junior Biology and (one of MBLG1001 and MBLG1901) and 6cp of Junior Chemistry Prohibitions: MBLG2972 Assumed knowledge: 12cp of Junior Chemistry Assessment: One 2 hour exam (50%), laboratory reports and quizzes (50%). Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Med Sc, B Sc, B Sc (Marine Science), B Sc (Molecular Biology & Genetics), B Sc (Molecular Biotechnology), UG Study Abroad Program.
Note: For students planning a Molecular Biology and Genetics major, 12cp of Junior Chemistry is required.
This unit of study shows how modern molecular biology is being applied to the study of the genetics of all life forms from humans and other complex multicellular organisms through to single celled organisms such as bacteria. Students will be introduced to more complex modes of Mendelian inheritance including those involved in human diseases. The molecular basis for different patterns of inheritance will be discussed. The interaction of genes and gene products will be illustrated by the examination of the molecular genetics of development. The application of genomics to the study of genetic variation and gene function in humans and model organisms, as well as to an understanding of molecular evolution, will be described. Practical: In laboratory exercises you will investigate the genetics of a variety of prokaryotic and eukaryotic organisms in order to illustrate concepts covered in the lecture material. Students will develop familiarity and competence with equipment used in molecular genetic analysis, bioinformatics, microscopy and statistical tests. Generic skills are developed in report writing, oral presentation, problem solving and data analysis. Successful completion of this unit of study is required in order to progress to the Bachelor of Science major in Molecular Biology and Genetics.
MBLG2972 Genetics and Genomics (Adv)

Credit points: 6 Teacher/Coordinator: Dr Penny Smith Session: Semester 2 Classes: Two 1-hour lectures per week; one 2-3 hour practical per week. One tutorial every second week. Prerequisites: Distinction average across 6cp of Junior and 6cp of Bology, 6 cp of Junior Molecular Biology and Genetics and 6cp of Junior Chemistry Prohibitions: MBLG2072 Assumed knowledge: 12cp of Junior Chemistry Assessment: One 2-hour exam (50%), laboratory reports and quizzes (50%). Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B E, B Med Sc, B Sc, B Sc (Marine Science), B Sc (Molecular Biology & Genetics), B Sc (Molecular Biotechnology), UG Study Abroad Program.
Note: For students planning for a molecular biology and genetics major, 12cp of Junior Chemistry is required.
Qualified students will participate in alternative components of MBLG2072, Genetics and Genomics. The content and nature of these components may vary from year to year.
Senior units of study
BIOL3009 Terrestrial Field Ecology

Credit points: 6 Teacher/Coordinator: Dr G Wardle Session: Int August Classes: Note: 1x6 day field trip held in the pre-semester break and 4x4 hr practical classes during weeks 1-4 in Semester 2. Prerequisites: 12 credit points of Intermediate Biology or (ANSC2004 and (BIOM2001 or ENVX2001). Prohibitions: BIOL3909 Assumed knowledge: BIOL (3006 or 3906). Prior completion of one of these units is very strongly recommended. Assessment: Discussions and quiz (10%), research project proposal and brief presentation (10%), sampling project report (20%), specimen collection (10%), research project report (50%). Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B An Vet Bio Sc, B Env Sys, B Med Sc, B Sc, B Sc (Marine Science), UG Study Abroad Program.
Note: One 6 day field trip held in the pre-semester break (22- 27 July 2012), and 4x4 hr practical classes during weeks 1-4 in Semester 2.
This field course provides practical experience in terrestrial ecology suited to a broad range of careers in ecology, environmental consulting and wildlife management. Students learn a broad range of ecological sampling techniques and develop a detailed understanding of the logical requirements necessary for manipulative ecological field experiments. The field work incorporates survey techniques for plants, small mammals and invertebrates and thus provides a good background for ecological consulting work. Students attend a week-long field course and participate in a large-scale research project as well as conducting their own research project. Invited experts contribute to the lectures and discussions on issues relating to the ecology, conservation and management of Australia's terrestrial flora and fauna.
BIOL3909 Terrestrial Field Ecology (Advanced)

Credit points: 6 Teacher/Coordinator: Dr G Wardle. Session: Int August Classes: See BIOL3009. Prerequisites: Distinction average in 12 credit points of Intermediate Biology or ANSC2004 and BIOM2001 Prohibitions: BIOL3009 Assumed knowledge: BIOL (3006 or 3906). Prior completion of one of these units is very strongly recommended. Assessment: Discussions and quiz (10%), research project proposal and brief presentation (10%), sampling project report (20%), sample and data processing (10%), research project report (50%). Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Med Sc, B Sc, B Sc (Marine Science), UG Study Abroad Program.
Note: One 6 day field trip held in the pre-semester break (22 - 27 July 2012) and 4x4 hr practical classes during weeks 1-4 in Semester 2.
This unit has the same objectives as BIOL3009 Terrestrial Field Ecology, and is suitable for students who wish to pursue certain aspects in greater depth. Entry is restricted, and selection is made from applicants on the basis of previous performance. Students taking this unit of study will complete an individual research project on a topic negotiated with a member of staff. It is expected that much of the data collection will be completed during the field trip but some extra time may be needed during semester 2. Specific details of this unit of study and assessment will be announced in meetings with students at the beginning of the unit. This unit of study may be taken as part of the BSc (Advanced) program.
BIOL3017 Fungi in the Environment

Credit points: 6 Teacher/Coordinator: A/Prof P McGee Session: Int February Classes: 40 hours of practicals in a two week intensive program held immediately prior to semester one (laboratory component each morning from 18 February to 1 March 2013), plus the equivalent of 30 hours self-guided study during the semester. Prerequisites: 12 credit points of Intermediate Biology or Plant Science, or 6 credit points of Intermediate Biology, or Plant Science, and 6 Intermediate credit points of either Microbiology or Geography. Prohibitions: BIOL3917 Assessment: Selected from 1x2 hr take home exam, laboratory component and written assignments (100%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Med Sc, B Sc, B Sc (Marine Science), UG Study Abroad Program.
Note: Dates: Monday 18th February to Friday 1st of March 2013.The completion of 6 credit points of MBLG units is highly recommended.Please note that this unit will not be available after 2013.
The unit is designed to develop understanding of fungal ecology in relation to environmental and rehabilitation biology, biological control of pests and pathogens, and soil microbiology. Emphasis will be placed on the function of fungi, and the benefit provided by fungi in symbiotic interactions with plants, including mycorrhizal fungi and endophytes. Physiological and ecological implications of the interactions will also be considered. Each student will design and implement a research project. Analytical thinking and research-led activity will be encouraged. Using broad scientific approaches, each student will gain the capacity to work cooperatively to find and analyse information from primary sources, develop approaches to test their understanding, and to present their work in a scientifically acceptable manner. Students will develop a deeper understanding of one area of fungal biology through independent study. Part of the learning material will be available on the internet
BIOL3917 Fungi in the Environment (Advanced)

Credit points: 6 Teacher/Coordinator: A/Prof P McGee Session: Int February Classes: 40 hours of practicals in a two week intensive program held immediately prior to semester one (laboratory component each morning from 18 February to 1 March 2013), plus the equivalent of 30 hours self-guided study during the semester. Prerequisites: Distinction average in 12 credit points of Intermediate Biology and Plant Science, or 6 credit points of Intermediate Biology, or Plant Science, and 6 Intermediate credit points of either Microbiology or Geography. Prohibitions: BIOL3017 Assessment: Selected from 1x2 hr take home exam, laboratory and written assignments (100%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Med Sc, B Sc, B Sc (Marine Science), UG Study Abroad Program.
Note: The completion of 6 credit points of MBLG units is highly recommended.Please note that this unit will not be available after 2013.
Qualified students will be encouraged to develop a research project under supervision. The content and nature of the research will be agreed on with the executive officer.
PLNT3001 Plant, Cell and Environment

Credit points: 6 Teacher/Coordinator: A/Prof Charles Warren and Dr Brian Jones. Session 2: Contributors: A/Prof Charles Warren, Dr Brian Jones, A/Prof Margaret Barbour, A/Prof Michael Kertesz. Session: Semester 2 Classes: Workshops and discussions 2 hr/wk; laboratories: alternate weeks 30 hr total (6 pracs; 5 hr each) Prerequisites: 12 credit points of Intermediate Biology, Plant Science, Molecular Biology and Genetics Prohibitions: PLNT3901 Assessment: 1x 2hr exam (40%), 2x reports (30%), 1x essay (15%), 1x group presentation (15%). Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Agr Ec, B Env Sys, B Hort Sc, B L W Sc, B Med Sc, B Res Ec, B Sc, B Sc (Marine Science), B Sc (Molecular Biotechnology), B Sc Agr, UG Study Abroad Program.
This unit of study of comprises lectures/workshops and practical sessions that will explore how plants function and interact with their environment. Classes will examine the mechanisms plants have evolved to adapt and acclimate to varied and variable environments. We will address how plants adapt to their light environment and how they respond to common abiotic stresses (e.g. drought, salinity) and biotic stresses (herbivory) and how they interact with other organisms. Emphasis will be placed on integration of plant responses from molecular through to whole plant scales. You will need to draw on knowledge from intermediate units of study and explore the published literature to successfully integrate information from areas unfamiliar to yourself. The purpose of this Unit of Study is to develop an understanding of current directions in Plant Science at an advanced level. When you have successfully completed this unit of study, you should be able to: be familiar with modern approaches of physiology, biophysics and molecular biology in the study of plant function; understand how domains of knowledge interact to describe plant function; understand how plants function in stressful environments; carry out a small research project; draft a manuscript for publication in a peer-reviewed journal.
Textbooks
Students will be drawing on the current research literature for content. A Study Guide for the unit will be available for purchase during the first week of semester from the Copy Centre at a cost to be advised.
PLNT3901 Plant, Cell and Environment (Advanced)

Credit points: 6 Teacher/Coordinator: A/Prof Charles Warren, Dr Brian Jones. Session 2: Contributors: A/Prof Charles Warren, Dr Brian Jones, A/Prof Margaret Barbour, A/Prof Michael Kertesz Session: Semester 2 Classes: Workshops and discussions 2 hr/wk; laboratories: alternate weeks 30 hr total (6 pracs; 5 hr each) Prerequisites: 12 credit points of Intermediate Biology, Plant Science, Molecular Biology and Genetics Prohibitions: PLNT3001 Assessment: 1x 2hr exam (40%), 2x reports (30%), 1x essay (15%), 1x group presentation (15%) Associated degrees: B A, B A (Adv)(Hons), B A (Adv)(Hons), M B B S, B Agr Ec, B Hort Sc, B L W Sc, B Med Sc, B Res Ec, B Sc, B Sc (Marine Science), B Sc (Molecular Biotechnology), B Sc Agr, UG Study Abroad Program.
Note: Department permission required for enrolment
This unit of study of comprises lectures/workshops and practical sessions that will explore how plants function and interact with their environment. Classes will examine the mechanisms plants have evolved to adapt and acclimate to varied and variable environments. We will address how plants adapt to their light environment and how they respond to common abiotic stresses (e.g. drought, salinity) and biotic stresses (herbivory) and how they interact with other organisms. Emphasis will be placed on integration of plant responses from molecular through to whole plant scales. You will need to draw on knowledge from intermediate units of study and explore the published literature to successfully integrate information from areas unfamiliar to yourself. The purpose of this Unit of Study is to develop an understanding of current directions in Plant Science at an advanced level. When you have successfully completed this unit of study, you should be able to: be familiar with modern approaches of physiology, biophysics and molecular biology in the study of plant function; understand how domains of knowledge interact to describe plant function; understand how plants function in stressful environments; carry out a small research project; draft a manuscript for publication in a peer-reviewed journal.
Textbooks
Students will be drawing on the current research literature for content. A Study Guide for the unit will be available for purchase during the first week of semester from the Copy Centre at a cost to be advised.
PLNT3002 Plant Growth and Development

Credit points: 6 Teacher/Coordinator: A/Prof Jan Marc (Executive Officer), Prof Robyn Overall, Prof David Guest, Dr Penny Smith, A/Prof Robyn McConchie, Dr Brian Jones Session: Semester 2 Classes: 2 lec per wk, one 4 hr practical on alternate weeks (6 weeks only), one 3 hr presentation of research project in week 13. Prerequisites: 12 credit points of intermediate PLNT, BIOL, AGCH or CROP units of study including at least one of PLNT2001, PLNT2901, PLNT2003, PLNT2903, BIOL2016, BIOL2916, BIOL2003, BIOL2903, BIOL2006, BIOL2906, CROP2001, AGCH2002 Prohibitions: PLNT3902, BIOL3021, BIOL3931 Assessment: 1x 2 hr exam (60%), project presentation and report (20%), laboratory quizzes, report and book (20%). Associated degrees: B Agr Ec, B Env Sys, B Hort Sc, B L W Sc, B Med Sc, B Res Ec, B Sc, B Sc Agr, UG Study Abroad Program.
This unit explores the mechanisms underlying plant growth and development from seed to maturity. It covers the process of building the plant body from embryogenesis, development and operation of meristems, polarity, patterning, controls of flowering and fruit development to programmed cell death and senescence. It includes the role of signals such as plant hormones in coordinating plant growth and development and the molecular and cellular mechanisms underlying plant responses to environmental signals such as gravity and light. There is a focus on recent plant molecular biology that has been critical in enhancing our current understanding of plant growth and development. The unit uses examples from crop, horticultural and native plants as well as the model plant Arabidopsis. Lectures are augmented by experimental work, including and independent research project. The laboratory work will include plant tissue culture, protoplast production and modern cell biological techniques used to study plant development. This unit of study complements other senior units of study in the Plant Science Major and is essential for those seeking a career in plant molecular biology.
Textbooks
Taiz L, Zeiger E (2010) Plant Physiology 5th ed. Sinauer Associates, Sunderland, Massachusetts Recommended reading: Atwell B, Kriedemann P, Turnbull C (1999) Plants in Action. Macmillan, South Yarra. Buchanan BB, Gruissem W, Jones RL (2000) Biochemistry and Molecular Biology of Plants, ASPP, Rockville, Maryland. A Study Guide for the unit will be available for purchase from the Copy Centre during the first week of semester.
PLNT3902 Plant Growth and Development (Advanced)

Credit points: 6 Teacher/Coordinator: A/Prof Jan Marc (Executive Officer), Prof Robyn Overall, Prof David Guest, Dr Penny Smith, A/Prof Robyn McConchie, Dr Brian Jones Session: Semester 2 Classes: 2-3 lec per wk, one 4 hr practical on alternate weeks (6 weeks only), one 3 hr presentation of research project in week 13 Prerequisites: 12 credit points of intermediate PLNT, BIOL, AGCH or CROP units of study including at least one of PLNT2001, PLNT2901, PLNT2003, PLNT2903, BIOL2016, BIOL2916, BIOL2003, BIOL2903, BIOL2006, BIOL2906, CROP2001, AGCH2002. These requirements may be varied and students with lower averages should consult the unit Executive Officer. Prohibitions: PLNT3002, BIOL3021, BIOL3931 Assessment: 1x 2 hr exam (60%), project presentation and report (20%), laboratory quizzes and book (20%). Associated degrees: B Agr Ec, B Hort Sc, B L W Sc, B Med Sc, B Res Ec, B Sc, B Sc Agr, UG Study Abroad Program.
Qualified students will participate in alternative components of PLNT3002 Plant Growth and Development, representing 30% of the total assessment, as follows: the students will be exempt from one standard laboratory report and the standard independent group project. Instead, the students will conduct an advanced independent individual practical or theoretical research project under the supervision of a member of the academic staff. The program includes a formal presentation of the results of the project in verbal and written reports.
Textbooks
Taiz L, Zeiger E (2010) Plant Physiology 5th ed. Sinauer Associates, Sunderland, Massachusetts Recommended reading: Atwell B, Kriedemann P, Turnbull C (1999) Plants in Action. Macmillan, South Yarra. Buchanan BB, Gruissem W, Jones RL (2000) Biochemistry and Molecular Biology of Plants, ASPP, Rockville, Maryland. A Study Guide for the unit will be available for purchase from the Copy Centre during the first week of semester.
PLNT3003 Systematics and Evolution of Plants

Credit points: 6 Teacher/Coordinator: A/Prof Murray Henwood Session: Semester 1 Classes: 2x1hr lectures/week, 1x3 hr practical/week, 2-day field-trip during semester. Prerequisites: 6 credit points of any Intermediate unit of study from BIOL, PLNT, LWSC, HORT, GEOS, GEOG, ENVI, SOIL. Prohibitions: PLNT3903 Assessment: 1x2 hr take-home exam (45%), oral presentation (5%), nomenclature exercise (15%), research project (35%). Associated degrees: B Env Sys, B Hort Sc, B Med Sc, B Sc, B Sc (Adv), M B, B S, B Sc Agr, UG Study Abroad Program.
This unit of study introduces students to the practical aspects of Plant Systematics and Evolution. Students will gain a working knowledge of the general techniques and approaches used in Plant Systematics (including an understanding of plant taxonomy, phylogenetics and evolutionary processes). A range of data sources (nucleotide sequences and morphology) will be used to address questions concerning the evolution, classification and historical biogeography of various plant groups. A two-day field trip will provide tuition in plant identification and an opportunity to acquire skills in field-botany . This unit of study is recommended for students with an interest in the areas of: botany, plant science, horticulture, fungal biology (including plant pathology), environmental science, bioinformatics and ecology. It is often combined with units of study offered through the School of Biological Sciences and the Faculty of Agriculture, Food and Natural Resources.
Textbooks
Jud, WS, Campbell, CS, Kellog, EA, Stevens, PF and Donohuge, MJ. 2002. Plant Systematics: A Phylogenetic Approach.
PLNT3903 Systematics and Evolution of Plants Adv

Credit points: 6 Teacher/Coordinator: A/Prof Murray Henwood Session: Semester 1 Classes: 2x1hr lectures/week, 1x3 hr practical/week, 2-day field-trip during semester. Prerequisites: Distinction average in 6 credit points of any Intermediate unit of study from BIOL, PLNT, LWSC, HORT, GEOS, GEOG, ENVI, SOIL. These requirements may be varied and students with lower averages should consult the Unit Executive Officer. Prohibitions: PLNT3003 Assessment: 1x2 hr take-home exam (45%), oral presentation (5%), nomenclature exercise (15%), research project (35%). Associated degrees: B Med Sc, B Sc, B Sc (Adv), M B, B S, UG Study Abroad Program.
Qualified students will participate in alternative components of PLNT3003 Systematics and Evolution of Plants. The content and nature of these components may vary from year to year.
Textbooks
Jud, WS, Campbell, CS, Kellog, EA, Stevens, PF and Donohuge, MJ. 2002. Plant Systematics: A Phylogenetic Approach.
PPAT3003 Plant Disease

Credit points: 6 Teacher/Coordinator: Prof David Guest Session: Semester 1 Classes: (2 lec, 3h prac)/wk Prerequisites: MICR2024 Assessment: One 2h end of semester exam (60%), one prac exam (25%), six take-home quizzes (15%). Associated degrees: B Hort Sc, B L W Sc, B Med Sc, B Sc, B Sc Agr, UG Study Abroad Program.
This unit introduces plant disease and the pathogens that limit agricultural and horticultural production. The unit is core to the BScAgr and BHortSc degrees and is available as an elective to BLWS and BSc students. It builds on the material introduced in MICR2024. The lecture component of the unit discusses the aetiology of plant disease and symptom development; diagnosis of plant disease; the biology, epidemiology and management of fungi and other microbes that cause plant disease; breeding for disease resistance; plant-parasite relationships; and disease resistance in plants. The practical component introduces techniques used in handling and identifying fungi and in studying plant disease, and develops skills in experimental design, execution and interpretation of experimental data. At the completion of this unit, students will be able to exercise problem-solving skills (developed through practical experiments and lecture discussions), think critically, and organise knowledge (from consideration of the lecture material and preparation of practical reports), expand from theoretical principles to practical explanations (through observing and reporting on practical work), use certain computer software for analysing data and reporting on laboratory projects. Students learn to work in a research team, plan effective work schedules (to meet deadlines for submission of assessable work), use statistical analysis in research, keep appropriate records of laboratory research, work safely in a research laboratory and operate a range of scientific equipment. Students will gain research and inquiry skills through research based group projects, information literacy and communication skills through assessment tasks and personal and intellectual autonomy through working in groups.
Textbooks
Schumann GL & Darcy CJ 2006. Essential Plant Pathology. APS Press, St Paul, Minn., USA.
PPAT4004 Advanced Mycology and Plant Pathology

Credit points: 6 Teacher/Coordinator: Prof David Guest Session: Semester 1 Classes: (2 tut, 3 hrs prac)/wk Prerequisites: PPAT3003 Assessment: Two hour end of semester exam (70%), 1500-word review paper (30%). Associated degrees: B Hort Sc, B L W Sc, B Med Sc, B Sc, B Sc Agr, UG Study Abroad Program.
This unit investigates evolution, systematics, taxonomy and biology of fungi and their role as plant pathogens; plant disease epidemiology and understanding fungal populations; infection processes and plant defence. The unit is an elective for BScAgr, BHortSc and BSc students. It builds on the material introduced in PPAT3003 and BIOL3017. Undertaking this unit will develop skills in isolating and identifying plant pathogenic fungi, diagnosing plant diseases, designing, conducting and analysing experiments. At the completion of this unit, students will be able to exercise problem-solving skills (developed through practical experiments, projects and tutorial discussions), think critically, and organise knowledge (from consideration of the lecture material and preparation of project reports), and expand from theoretical principles to practical explanations (through observing and reporting on project work). Students will consolidate their teamworking skills, develop self-directed study skills and plan effective work schedules, use statistical analysis in research, keep appropriate records of laboratory research, work safely in a research laboratory and operate a range of scientific equipment. Students will gain research and inquiry skills through individual and group research projects, information literacy and communication skills through assessment tasks and personal and intellectual autonomy through working in groups.
Textbooks
Agrios GN. 2005. Plant Pathology 5th ed. Academic Press
PPAT4005 Soil Biology

Credit points: 6 Teacher/Coordinator: Prof David Guest Session: Semester 1 Classes: (2 tut, 3 hrs prac)/wk Prerequisites: MICR2024 or 6cp intermediate microbiology Assessment: Tutorial papers (30%), project proposal (10%), project report (50%), peer review (10%). Associated degrees: B Env Sys, B Hort Sc, B L W Sc, B Med Sc, B Sc, B Sc Agr, UG Study Abroad Program.
This unit investigates the diversity of organisms living in the soil, their biology, interactions and ecology, and their roles in maintaining and improving soil function. The unit is an elective for BScAgr, BHortSc and BSc students. It builds on the material introduced in MICR2024, PPAT3003 and BIOL3017. Undertaking this unit will develop skills in monitoring soil microbes, designing, conducting and analysing experiments. At the completion of this unit, students will be able to exercise problem-solving skills (developed through practical experiments, projects and tutorial discussions), think critically, and organise knowledge (from consideration of the lecture material and preparation of project reports), and expand from theoretical principles to practical explanations (through observing and reporting on project work). Students will consolidate their teamworking skills, develop self-directed study skills and plan effective work schedules, use statistical analysis in research, keep appropriate records of laboratory research, work safely in a research laboratory and operate a range of scientific equipment. Students will gain research and inquiry skills through group research projects, information literacy and communication skills through assessment tasks and personal and intellectual autonomy through working in groups.
Textbooks
Sylvia et al. 2005. Principles and Applications of Soil Microbiology 2nd ed. Pearson.
HORT3005 Production Horticulture

Credit points: 6 Teacher/Coordinator: Associate Professor Robyn McConchie Session: Semester 1 Classes: (2x1hr lec; 1x3hr prac/workshop)/wk Prerequisites: Two of PLNT2001, PLNT2901, PLNT2002, PLNT2902, PLNT2003, PLNT2903 Assumed knowledge: AFNR1001 and AFNR1002 Assessment: One 3 hr exam (55%), three assignments (45%). Associated degrees: B Hort Sc, B L W Sc, B Med Sc, B Sc, B Sc Agr, UG Study Abroad Program.
This unit of study covers topics on the production of perennial fruit crops, wine grapes, the sustainable production of vegetables and it also covers the key aspects of the postharvest handling and quality assurance of fresh produce. At the end of this unit students are expected to have a detailed understanding of these areas of horticulture and be able to discuss related literature and the physiological principles underlying the commercial success of these horticultural enterprises. Students will also gain research and enquiry skills through research based practical sessions and assignments.
Textbooks
Recommended reading: