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Unit of study_

Computational Genomics - GEGE3004

The average mammalian genome is 3 billion nucleotides long and some other organisms have genomes that are even larger. Working with DNA at the nucleotide level on an organismal scale is impossible without the assistance of high performance computing. This unit will investigate strategies to manipulate genomic data on a whole organism scale. You will learn how scientists use high performance computing and web-based resources to compare and assemble genomes, map genes that cause specific phenotypes, and uncover mutations that cause phenotypic changes in organisms that influence health, external characteristics, production and disease. By doing this unit you will develop skills in the analysis of big data, you will gain familiarity with high performance computing worktop environments and learn to use bioinformatics tools that are commonly applied in research.

Classes
Lectures 2 hours per week, Practical 3hours per week during standard semester.

Assessment
The assessment will consist of one intra-semester examination (20%), group work assignment (30%)[ including assessment both of a project report (20%) and the team process (10%)], individual assignment (10%) and final examination (40%).

Additional information
This unit must be taken by all students in the Genetics and Genomics major.

Assumed knowledge
Genetics at 2000 level, Biology at 1000 level, algebra

Pre-requisites

6cp of (GEGE2X01 or QBIO2XXX or DATA2X01 or GENE2XXX or MBLG2X72 or ENVX2001 or DATA2X02)

Prohibitions

ANSC3107

Details

Faculty: Science

Semester 2

05 Aug 2019

Department/School: Life and Environmental Sciences Academic Operations
Study Mode: Normal (lecture/lab/tutorial) evening
Census Date: 31 Aug 2019
Unit of study level: Senior
Credit points: 6.0
EFTSL: 0.125
Available for study abroad and exchange: Yes
Faculty/department permission required? No
Location
Camperdown
More details
Unit of Study coordinator: Prof Claire Wade
HECS Band: 2
Courses that offer this unit

Non-award/non-degree study If you wish to undertake one or more units of study (subjects) for your own interest but not towards a degree, you may enrol in single units as a non-award student. Cross-institutional study If you are from another Australian tertiary institution you may be permitted to undertake cross-institutional study in one or more units of study at the University of Sydney.

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