Dr Ying Wang

F07 - Carslaw Building
The University of Sydney


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Teaching and supervision

Timetable

RYX_Wang

Current research students

Project title Research student
Statistical tools for characterising cell types and communication networks Yingxin LIN

Selected grants

2018

  • Statistical theory and algorithms for joint inference of complex networks; Wang Y; Australian Research Council (ARC)/Discovery Early Career Researcher Award (DECRA).

Selected publications

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Journals

  • Wang, Y., Liu, K., Theusch, E., Rotter, J., Medina, M., Waterman, M., Huang, H. (2018). Generalized correlation measure using count statistics for gene expression data with ordered samples. Bioinformatics, 34(4), 617-624. [More Information]
  • Ursu, O., Boley, N., Taranova, M., Wang, Y., Yardimci, G., Noble, W., Kundaje, A. (2018). GenomeDISCO: A concordance score for chromosome conformation capture experiments using random walks on contact map graphs. Bioinformatics, 34(16), 2701-2707. [More Information]
  • Wang, Y., Bickel, P. (2017). Likelihood-based model selection for stochastic block models. Annals of Statistics, 45(2), 500-528. [More Information]
  • Bhaskar, A., Wang, Y., Song, Y. (2015). Efficient inference of population size histories and locus-specific mutation rates from large-sample genomic variation data. Genome Research, 25(2), 268-279. [More Information]
  • Wang, Y., Jiang, K., Feldman, L., Bickel, P., Huang, H. (2015). Inferring gene�gene interactions and functional modules using sparse canonical correlation analysis. Annals of Applied Statistics, 9(1), 300-323. [More Information]
  • Wang, Y., Waterman, M., Huang, H. (2014). Gene coexpression measures in large heterogeneous samples using count statistics. Proceedings of the National Academy of Sciences of the United States of America, 111(46), 16371-16376. [More Information]
  • Wang, Y., Huang, H. (2014). Review on statistical methods for gene network reconstruction using expression data. Journal of Theoretical Biology, 362(7), 53-61. [More Information]
  • Steinrucken, M., Wang, Y., Song, Y. (2013). An explicit transition density expansion for a multi-allelic. Theoretical Population Biology, 83(1), 1-14. [More Information]
  • Wang, Q., Wang, Y. (2013). Nonparametric cointegrating regression with NNH errors. Econometric Theory, 29(1), 1-27. [More Information]
  • Zhang, X., Wang, Y., Cox, F., Kuhlmey, B., Large, M. (2007). Selective coating of holes in microstructured optical fiber and its application to in-fiber absorptive polarizers. Optics Express, 15(24), 16270-16278. [More Information]

Conferences

  • Mukherjee, S., Sarkar, P., Wang, Y., Yan, B. (2018). Mean Field for the Stochastic Blockmodel: Optimization Landscape and Convergence Issues. 32nd Conference on Neural Information Processing Systems (NIPS 2018), Montreal: Neural Information Processing Systems Foundation, Inc.
  • Zhang, X., Wang, Y., Cox, F., Kuhlmey, B., Large, M., Argyros, A. (2007). Selective coating of holes in microstructured optical fibre and its application to in-fibre absorptive polarizers. ICMAT 2007 Symposium on Microstructured and Nanostructured Optical Fibers. International Conference on Materials for Advanced Technologies 2007, Singapore: Materials Research Society.
  • Wang, Y., Zhang, X., Cox, F., Kuhlmey, B., Large, M. (2007). Silver coatings in selected holes of microstructured polymer optical fibres. Joint International Conference on Optical Internet, 2007 and the 2007 32nd Australian Conference on Optical Fibre Technology, COIN-ACOFT 2007, Melbourne, Australia: Coin/Acoft.
  • Luther-Davies, B., Madden, S., Choi, D., Wang, Y., Rode, A., Prasad, A., Jarvis, R., Moss, D., Eggleton, B., Grillet, C., Lamont, M., Magi, E., Ta'eed, V., Shokooh-Saremi, M., Baker, N., Littler, I., Fu, L., Rochette, M., et al (2006). Chalcogenide Glasses for All-Optical Processing. IEEE 2006 International Conference on Photonics in Switching, United States: Institute of Electrical and Electronics Engineers (IEEE).

2018

  • Wang, Y., Liu, K., Theusch, E., Rotter, J., Medina, M., Waterman, M., Huang, H. (2018). Generalized correlation measure using count statistics for gene expression data with ordered samples. Bioinformatics, 34(4), 617-624. [More Information]
  • Ursu, O., Boley, N., Taranova, M., Wang, Y., Yardimci, G., Noble, W., Kundaje, A. (2018). GenomeDISCO: A concordance score for chromosome conformation capture experiments using random walks on contact map graphs. Bioinformatics, 34(16), 2701-2707. [More Information]
  • Mukherjee, S., Sarkar, P., Wang, Y., Yan, B. (2018). Mean Field for the Stochastic Blockmodel: Optimization Landscape and Convergence Issues. 32nd Conference on Neural Information Processing Systems (NIPS 2018), Montreal: Neural Information Processing Systems Foundation, Inc.

2017

  • Wang, Y., Bickel, P. (2017). Likelihood-based model selection for stochastic block models. Annals of Statistics, 45(2), 500-528. [More Information]

2015

  • Bhaskar, A., Wang, Y., Song, Y. (2015). Efficient inference of population size histories and locus-specific mutation rates from large-sample genomic variation data. Genome Research, 25(2), 268-279. [More Information]
  • Wang, Y., Jiang, K., Feldman, L., Bickel, P., Huang, H. (2015). Inferring gene�gene interactions and functional modules using sparse canonical correlation analysis. Annals of Applied Statistics, 9(1), 300-323. [More Information]

2014

  • Wang, Y., Waterman, M., Huang, H. (2014). Gene coexpression measures in large heterogeneous samples using count statistics. Proceedings of the National Academy of Sciences of the United States of America, 111(46), 16371-16376. [More Information]
  • Wang, Y., Huang, H. (2014). Review on statistical methods for gene network reconstruction using expression data. Journal of Theoretical Biology, 362(7), 53-61. [More Information]

2013

  • Steinrucken, M., Wang, Y., Song, Y. (2013). An explicit transition density expansion for a multi-allelic. Theoretical Population Biology, 83(1), 1-14. [More Information]
  • Wang, Q., Wang, Y. (2013). Nonparametric cointegrating regression with NNH errors. Econometric Theory, 29(1), 1-27. [More Information]

2007

  • Zhang, X., Wang, Y., Cox, F., Kuhlmey, B., Large, M. (2007). Selective coating of holes in microstructured optical fiber and its application to in-fiber absorptive polarizers. Optics Express, 15(24), 16270-16278. [More Information]
  • Zhang, X., Wang, Y., Cox, F., Kuhlmey, B., Large, M., Argyros, A. (2007). Selective coating of holes in microstructured optical fibre and its application to in-fibre absorptive polarizers. ICMAT 2007 Symposium on Microstructured and Nanostructured Optical Fibers. International Conference on Materials for Advanced Technologies 2007, Singapore: Materials Research Society.
  • Wang, Y., Zhang, X., Cox, F., Kuhlmey, B., Large, M. (2007). Silver coatings in selected holes of microstructured polymer optical fibres. Joint International Conference on Optical Internet, 2007 and the 2007 32nd Australian Conference on Optical Fibre Technology, COIN-ACOFT 2007, Melbourne, Australia: Coin/Acoft.

2006

  • Luther-Davies, B., Madden, S., Choi, D., Wang, Y., Rode, A., Prasad, A., Jarvis, R., Moss, D., Eggleton, B., Grillet, C., Lamont, M., Magi, E., Ta'eed, V., Shokooh-Saremi, M., Baker, N., Littler, I., Fu, L., Rochette, M., et al (2006). Chalcogenide Glasses for All-Optical Processing. IEEE 2006 International Conference on Photonics in Switching, United States: Institute of Electrical and Electronics Engineers (IEEE).

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