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Unit outline_

CPAT3202: Pathogenesis of Human Disease 2

Semester 2, 2020 [Normal day] - Camperdown/Darlington, Sydney

The Pathogenesis of Human Disease 2 unit of study modules will provide a practical background to the scientific basis of the pathogenesis of disease. Areas covered in practical modules include disease specimen evaluation on a macroscopic and microscopic basis. The aims of the course are: - To enable students to gain an understanding of how different organ systems react to injury and to apply basic concepts of disease processes. - To equip students with skills appropriate for careers in the biomedical sciences and for further training in research or professional degrees. At the end of the course students will: - Have acquired practical skills in the use of a light microscope. - Have an understanding of basic investigative techniques for disease detection in pathology. - Be able to evaluate diseased tissue at the macroscopic and microscopic level. - Have the ability to describe, synthesise and present information on disease pathogenesis. - Transfer problem-solving skills to novel situations related to disease pathogenesis. This unit of study would be appropriate for those who intend to proceed to Honours research, to postgraduate studies such as Medicine or to careers in biomedical areas such as hospital science. Enquiries should be directed to anthea.matsimanis@sydney.edu.au.

Unit details and rules

Academic unit
Credit points 6
Prerequisites
? 
12cp from {[ANAT2008 or ANAT2009 or (ANAT2010 or ANAT2910) or ANAT2011] or [(BCHM2071 or BCHM2971) or (BCHM2072 or BCHM2972)] or [(BCMB2001 or BCMB2901) or (BCMB2002 or BCMB2902)] or [(BIOL2021 or BIOL2921) or (BIOL2022 or BIOL2922) or (BIOL2024 or BIOL2924) or (BIOL2030 or BIOL2930) or (BIOL2031 or BIOL2931)] or [(GEGE2001 or GEGE2901)] or [(IMMU2101 or MICR2021 or MICR2921 or MICR2022 or MICR2922 or MICR2031 or MICR2931 or MIMI2002 or MIMI2902)] or [(MBLG2071 or MBLG2971) or (MBLG2072 or MBLG2972)] or [(PCOL2011 or PCOL2021) or (PCOL2012 or PCOL2022)] or [(PHSI2005 or PHSI2905) or (PHSI2006 or PHSI2906) or (PHSI2007 or PHSI2907) or [PHSI2008 or PHSI2908)] or [(BMED2403 and BMED2404)]} or [MEDS2004 and 6cp from (MEDS2001 or MEDS2002 or MEDS2003 or MEDS2005)]
Corequisites
? 
CPAT3201
Prohibitions
? 
CPAT3902
Assumed knowledge
? 

Sound knowledge of biology through meeting pre-requisites

Available to study abroad and exchange students

Yes

Teaching staff

Coordinator Melanie White, melanie.white@sydney.edu.au
Lecturer(s) Paul Witting, paul.witting@sydney.edu.au
Stuart Cordwell, stuart.cordwell@sydney.edu.au
Greg Sutherland, g.sutherland@sydney.edu.au
Gulfam Ahmad, gulfam.ahmad@sydney.edu.au
Bob Bao, bob.bao@sydney.edu.au
Type Description Weight Due Length
Final exam (Open book) Type C final exam Final exam
MCQ and short answer
60% Formal exam period 2 hours
Outcomes assessed: LO1 LO2 LO3 LO4 LO5 LO6 LO7
Small test Exam 1
MCQ - covering Renal and Intestinal modules
10% Week 07 30 mins
Outcomes assessed: LO1 LO7 LO5 LO2
Small test Exam 2
MCQ - covering Reproductive and Cardiovascular modules
10% Week 11 30 mins
Outcomes assessed: LO1 LO7 LO5 LO2
Assignment Research project
Written assignment
20% Week 12 1500 words
Outcomes assessed: LO1 LO2 LO3 LO4 LO5 LO6 LO7
Type C final exam = Type C final exam ?

Assessment summary

In-semester exam: The content being examined will include all relevant material for CPAT3202 up until (and including) the week prior to the exam.

Pathogenesis research project: Students will have a choice to complete either a research project report or a laboratory-based project report.

Final Exam:  Exam is comprised of multiple-choice questions and short answer questions.

Detailed information for each assessment can be found on Canvas.

Assessment criteria

The University awards common result grades, set out in the Coursework Policy 2014 (Schedule 1).

As a general guide, a high distinction indicates work of an exceptional standard, a distinction a very high standard, a credit a good standard, and a pass an acceptable standard.

Result name

Mark range

Description

High distinction

85 - 100

Awarded when you demonstrate the learning outcomes for the unit at an exceptional standard.

Distinction

75 - 84

Awarded when you demonstrate the learning outcomes for the unit at a very high standard.
Credit

65 - 74

Awarded when you demonstrate the learning outcomes for the unit at a good standard.

Pass

50 - 64

Awarded when you demonstrate the learning outcomes for the unit at an acceptable standard.

Fail

0 - 49

When you don’t meet the learning outcomes of the unit to a satisfactory standard.

For more information see guide to grades.

Late submission

In accordance with University policy, these penalties apply when written work is submitted after 11:59pm on the due date:

  • Deduction of 5% of the maximum mark for each calendar day after the due date.
  • After ten calendar days late, a mark of zero will be awarded.

This unit has an exception to the standard University policy or supplementary information has been provided by the unit coordinator. This information is displayed below:

Late assignments that have not been granted an extension will attract a penalty of 5% of the maximum mark per day late including weekend days (e.g. if the assignment is worth 40 marks, the penalty is 2 marks per day late). Assignments submitted more than 10 days late will be given a mark of zero (0).

Academic integrity

The Current Student website provides information on academic integrity and the resources available to all students. The University expects students and staff to act ethically and honestly and will treat all allegations of academic integrity breaches seriously.

We use similarity detection software to detect potential instances of plagiarism or other forms of academic integrity breach. If such matches indicate evidence of plagiarism or other forms of academic integrity breaches, your teacher is required to report your work for further investigation.

Use of generative artificial intelligence (AI) and automated writing tools

You may only use generative AI and automated writing tools in assessment tasks if you are permitted to by your unit coordinator. If you do use these tools, you must acknowledge this in your work, either in a footnote or an acknowledgement section. The assessment instructions or unit outline will give guidance of the types of tools that are permitted and how the tools should be used.

Your final submitted work must be your own, original work. You must acknowledge any use of generative AI tools that have been used in the assessment, and any material that forms part of your submission must be appropriately referenced. For guidance on how to acknowledge the use of AI, please refer to the AI in Education Canvas site.

The unapproved use of these tools or unacknowledged use will be considered a breach of the Academic Integrity Policy and penalties may apply.

Studiosity is permitted unless otherwise indicated by the unit coordinator. The use of this service must be acknowledged in your submission as detailed on the Learning Hub’s Canvas page.

Outside assessment tasks, generative AI tools may be used to support your learning. The AI in Education Canvas site contains a number of productive ways that students are using AI to improve their learning.

Simple extensions

If you encounter a problem submitting your work on time, you may be able to apply for an extension of five calendar days through a simple extension.  The application process will be different depending on the type of assessment and extensions cannot be granted for some assessment types like exams.

Special consideration

If exceptional circumstances mean you can’t complete an assessment, you need consideration for a longer period of time, or if you have essential commitments which impact your performance in an assessment, you may be eligible for special consideration or special arrangements.

Special consideration applications will not be affected by a simple extension application.

Using AI responsibly

Co-created with students, AI in Education includes lots of helpful examples of how students use generative AI tools to support their learning. It explains how generative AI works, the different tools available and how to use them responsibly and productively.

WK Topic Learning activity Learning outcomes
Multiple weeks Pathogenesis Project Project (11 hr) LO1 LO3 LO5 LO6 LO7
Week 01 Renal Pathology 1 Lecture (2 hr) LO1 LO2 LO3 LO4
Renal Pathology 1 Practical (1.5 hr) LO3 LO4 LO5 LO6 LO7
Week 02 Renal Pathology 2 Lecture and tutorial (3 hr) LO1 LO2 LO3 LO4 LO5 LO6 LO7
Week 03 Renal Pathology 3 Lecture (2 hr) LO1 LO2 LO3 LO4
Renal Pathology 3 Practical (1.5 hr) LO3 LO4 LO5 LO6 LO7
Week 04 Intestinal Pathology 1 Lecture (2 hr) LO1 LO2 LO3 LO4
Intestinal Pathology 1 Practical (1.5 hr) LO3 LO4 LO5 LO6 LO7
Week 05 Intestinal Pathology 2 Lecture and tutorial (3 hr) LO1 LO2 LO3 LO4 LO5 LO6 LO7
Week 06 Gynaecological Pathology 1 Lecture and tutorial (3 hr) LO1 LO2 LO3 LO4 LO5 LO6 LO7
Week 07 Gynaecological Pathology 2 Lecture (2 hr) LO1 LO2 LO3 LO4
Gynaecological Pathology 2 Practical (1.5 hr) LO3 LO4 LO5 LO6 LO7
Week 08 Cardiovascular Pathology 1 Lecture and tutorial (3 hr) LO1 LO2 LO3 LO4 LO5 LO6 LO7
Week 09 Cardiovascular Pathology 2 Lecture (2 hr) LO1 LO2 LO3 LO4
Cardiovascular Pathology 2 Practical (1.5 hr) LO3 LO4 LO5 LO6 LO7
Week 10 Cardiovascular Pathology 3 Lecture and tutorial (3 hr) LO1 LO2 LO3 LO4 LO5 LO6 LO7
Week 11 Neurological Pathology 1 Lecture (2 hr) LO1 LO2 LO3 LO4
Neurological Pathology 1 Practical (1.5 hr) LO3 LO4 LO5 LO6 LO7
Week 12 Neurological Pathology 2 Lecture and tutorial (3 hr) LO1 LO2 LO3 LO4 LO5 LO6 LO7

Attendance and class requirements

Students are required to attend a minimum of 80% of compulsory museum tutorials and microscope practicals for this unit, as per the University Coursework Policy.

Study commitment

Typically, there is a minimum expectation of 1.5-2 hours of student effort per week per credit point for units of study offered over a full semester. For a 6 credit point unit, this equates to roughly 120-150 hours of student effort in total.

Required readings

All readings for this unit can be accessed through the Library eReserve, available on Canvas.

  • Robbins Cotran Pathologic Basis of Disease; 10th edition; Vinay Kumar, Abul K. Abbas, Jon. C. Aster

Learning outcomes are what students know, understand and are able to do on completion of a unit of study. They are aligned with the University's graduate qualities and are assessed as part of the curriculum.

At the completion of this unit, you should be able to:

  • LO1. Demonstrate an understanding of how different organ systems react to injury and adapt to pathology
  • LO2. Identify how the basic concepts of disease processes apply to systemic pathologies that are associated with common diseases
  • LO3. Evaluate diseased tissue at the macroscopic and microscopic level
  • LO4. Demonstrate an understanding of basic investigative techniques for disease detection in pathology
  • LO5. Transfer problem-solving skills to novel situations related to disease pathogenesis
  • LO6. Find, describe, synthesise and present information on disease pathogenesis
  • LO7. Communicate scientific information appropriately, both orally and through written work

Graduate qualities

The graduate qualities are the qualities and skills that all University of Sydney graduates must demonstrate on successful completion of an award course. As a future Sydney graduate, the set of qualities have been designed to equip you for the contemporary world.

GQ1 Depth of disciplinary expertise

Deep disciplinary expertise is the ability to integrate and rigorously apply knowledge, understanding and skills of a recognised discipline defined by scholarly activity, as well as familiarity with evolving practice of the discipline.

GQ2 Critical thinking and problem solving

Critical thinking and problem solving are the questioning of ideas, evidence and assumptions in order to propose and evaluate hypotheses or alternative arguments before formulating a conclusion or a solution to an identified problem.

GQ3 Oral and written communication

Effective communication, in both oral and written form, is the clear exchange of meaning in a manner that is appropriate to audience and context.

GQ4 Information and digital literacy

Information and digital literacy is the ability to locate, interpret, evaluate, manage, adapt, integrate, create and convey information using appropriate resources, tools and strategies.

GQ5 Inventiveness

Generating novel ideas and solutions.

GQ6 Cultural competence

Cultural Competence is the ability to actively, ethically, respectfully, and successfully engage across and between cultures. In the Australian context, this includes and celebrates Aboriginal and Torres Strait Islander cultures, knowledge systems, and a mature understanding of contemporary issues.

GQ7 Interdisciplinary effectiveness

Interdisciplinary effectiveness is the integration and synthesis of multiple viewpoints and practices, working effectively across disciplinary boundaries.

GQ8 Integrated professional, ethical, and personal identity

An integrated professional, ethical and personal identity is understanding the interaction between one’s personal and professional selves in an ethical context.

GQ9 Influence

Engaging others in a process, idea or vision.

Outcome map

Learning outcomes Graduate qualities
GQ1 GQ2 GQ3 GQ4 GQ5 GQ6 GQ7 GQ8 GQ9

This section outlines changes made to this unit following staff and student reviews.

In response to student feedback, the teaching staff attend the museum tutorials.

Disclaimer

The University reserves the right to amend units of study or no longer offer certain units, including where there are low enrolment numbers.

To help you understand common terms that we use at the University, we offer an online glossary.